Table 2.
Resistance quantitative trait loci (QTL) identified in the winter wheat panel associated with stripe rust reactions evaluated at the seedling stage in the greenhouse with different races of Puccinia striiformis f. sp. tritici.
| QTL | Race | SNP | Chr a | Position (Mb) a | -log10(p) | MAF b | R2 c | Alleles d |
|---|---|---|---|---|---|---|---|---|
| QYrww.wgp.1A-3 | PSTv-4 | IWA3409 | 1AL | 571 | 3.01 | 0.08 | 0.11 | G/A |
| QYrww.wgp.1B | PSTv-4 | IWB44699 | 1BS | 2 | 3.91 | 0.15 | 0.12 | G/A |
| PSTv-14 | IWB44699 | 4.32 | 0.15 | 0.11 | G/A | |||
| PSTv-37 | IWB44699 | 3.05 | 0.15 | 0.11 | G/A | |||
| PSTv-40 | IWB44699 | 4.09 | 0.15 | 0.12 | G/A | |||
| PSTv-51 | IWB44699 | 3.09 | 0.15 | 0.11 | G/A | |||
| PSTv-198 | IWB44699 | 3.82 | 0.15 | 0.12 | G/A | |||
| QYrww.wgp.2A-2 | PSTv-51 | IWB25290 | 2AL | 737 | 3.34 | 0.06 | 0.11 | G/A |
| PSTv-51 | IWB6997 | 2AL | 739 | 4.19 | 0.10 | 0.09 | G/A | |
| PSTv-4 | IWB6997 | 3.57 | 0.10 | 0.12 | G/A | |||
| QYrww.wgp.2B-4 | PSTv-4 | IWB34793 | 2BL | 524 | 4.25 | 0.05 | 0.11 | G/A |
| PSTv-51 | IWB34793 | 3.88 | 0.05 | 0.12 | G/A | |||
| QYrww.wgp.2D-4 | PSTv-4 | IWA229 | 2DL | 619 | 3.72 | 0.06 | 0.23 | A/G |
| QYrww.wgp.3A | PSTv-40 | IWB44443 | 3AL | 639 | 3.68 | 0.07 | 0.18 | G/A |
| QYrww.wgp.4A-1 | PSTv-37 | IWB44966 | 4AL | 538 | 3.36 | 0.24 | 0.25 | A/G |
| QYrww.wgp.4A-2 | PSTv-51 | IWA5116 | 4AL | 605 | 3.22 | 0.20 | 0.14 | C/A |
| QYrww.wgp.4B | PSTv-14 | IWA2869 | 4BL | 666 | 3.52 | 0.09 | 0.13 | G/A |
| QYrww.wgp.5A | PSTv-51 | IWB43581 | 5AL | 644 | 4.50 | 0.11 | 0.22 | G/T |
| PSTv-198 | IWB43581 | 4.32 | 0.11 | 0.24 | G/T | |||
| QYrww.wgp.5B | PSTv-51 | IWB29509 | 5BL | 685 | 3.09 | 0.14 | 0.19 | G/A |
| PSTv-198 | IWB29509 | 3.16 | 0.14 | 0.25 | G/A | |||
| QYrww.wgp.5D | PSTv-4 | IWB16856 | 5DS | 59 | 4.44 | 0.11 | 0.15 | A/G |
| PSTv-14 | IWB16856 | 3.09 | 0.11 | 0.21 | A/G | |||
| PSTv-37 | IWB16856 | 4.30 | 0.11 | 0.13 | A/G | |||
| PSTv-40 | IWB16856 | 3.38 | 0.11 | 0.11 | A/G | |||
| PSTv-51 | IWB16856 | 4.73 | 0.11 | 0.12 | A/G | |||
| PSTv-198 | IWB16856 | 5.28 | 0.11 | 0.12 | A/G | |||
| QYrww.wgp.6A-1 | PSTv-14 | IWB52712 | 6AL | 356 | 3.16 | 0.43 | 0.11 | T/C |
| PSTv-198 | IWB52712 | 4.31 | 0.43 | 0.09 | T/C | |||
| QYrww.wgp.7B-2 | PSTv-14 | IWA6322 | 7BL | 457 | 4.25 | 0.20 | 0.24 | G/A |
| QYrww.wgp.7B-3 | PSTv-37 | IWB72939 | 7BL | 683 | 3.21 | 0.14 | 0.26 | G/A |
a
Chromosomes and positions of markers were determined according to IWGSC RefSeq v.1.1.
b
MAF, minor allele frequency.
c
R2 indicated phenotypic variance explained by the associated marker.
d
Resistance-associated allele was labeled in bold and underlined character.