Table 2.
Mutation of 20 Clusters within Indian SARS-CoV-2 genomes.
Start coordinate of mutation | End coordinate of mutation | Cluster size of mutation | Avg. occurrence of mutation in genomes | Type of mutation | Avg. entropy of cluster of mutation | Mapped with coding region |
---|---|---|---|---|---|---|
2 | 83 | 82 | 147 | Deletion | 0.2757 | 5′-UTR (Non-coding Region) |
3827 | 3877 | 51 | 1 | Deletion | 0.0150 | ORF1ab |
6508 | 6554 | 47 | 1 | Deletion | 0.0161 | ORF1ab |
6840 | 6877 | 38 | 3 | Deletion | 0.0363 | ORF1ab |
7020 | 7049 | 30 | 1 | Deletion | 0.0151 | ORF1ab |
7279 | 7334 | 56 | 3 | Deletion | 0.0341 | ORF1ab |
8345 | 8445 | 101 | 1 | Deletion | 0.0146 | ORF1ab |
19,306 | 19,354 | 49 | 1 | Deletion | 0.0145 | ORF1ab |
19,389 | 19,424 | 36 | 1 | Deletion | 0.0157 | ORF1ab |
19,497 | 19,550 | 54 | 2 | Deletion | 0.0267 | ORF1ab |
21,171 | 21,208 | 38 | 1 | Deletion | 0.0148 | ORF1ab |
21,459 | 21,502 | 44 | 2 | Deletion | 0.0196 | ORF1ab |
21,547 | 21,603 | 57 | 3 | Deletion | 0.0367 | ORF1ab |
23,403 | 23,405 | 3 | 112 | Substitution | 0.2485 | Spike |
23,966 | 24,018 | 53 | 3 | Deletion | 0.0362 | Spike |
26,340 | 26,399 | 60 | 6 | Deletion | 0.0540 | Envelope |
27,541 | 27,682 | 142 | 2 | Deletion | 0.0284 | ORF7a |
27,697 | 27,743 | 47 | 2 | Deletion | 0.0275 | ORF7a |
28,883 | 28,885 | 3 | 64 | Substitution | 0.3817 | Nucleocapsid |
29,742 | 29,904 | 163 | 142 | Deletion | 0.2406 | 3′-UTR (Non-coding Region) |