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. 2020 Jul 10;9:118. doi: 10.1038/s41377-020-00358-9

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© The Author(s) 2020

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Fig. 5 — Classification performance of our trained neural network for aK. pneumoniae, bE. coli, and cK. aerogenes colonies. The green shaded area in each curve represents the highest and lowest recovery rates found in all the corresponding experiments at each time point. d The blind testing confusion matrix of classifying all the colonies that were sent to our trained neural network after 12h of incubation. A diagonal entry of 1.0 means a 100% classification accuracy for that species. The numbers of colonies that were tested by the classification network in d are 325 (E. coli), 334 (K. pneumoniae), and 256 (K. aerogenes)