Table 3.

Co-expressed gene pairs and their common associated diseases/traits

Chr	Gene in region 1	Gene in region 2	Disease/trait	Significant tissues
Chr 1	AK5	CADM3	Educational attainment (years of education)	Brain Nucleus accumbens basal ganglia
Chr 1	DPH5	DAP3	Inflammatory bowel disease	Uterus
Chr 1	ELTD1	DARC	White blood cell count	Artery Aorta;Artery Tibial; Colon Transverse; Esophagus Gastroesophageal Junction; Esophagus Mucosa; Ovary; Skin Not Sun Exposed Suprapubic; Vagina
Chr 1	ELTD1	DCST2	Eosinophil counts	Adipose Subcutaneous
Chr 1	GFI1	SLAMF7	Multiple sclerosis	Heart Atrial Appendage; Ovary; Uterus
Chr 1	MIR137HG	CADM3	Educational attainment (years of education)	Brain Hypothalamus
Chr 1	MTF2	NDUFS2	Eosinophil counts	Brain Hippocampus
Chr 1	PKN2	ASH1L	Red blood cell count	Skin Not Sun Exposed Suprapubic
Chr 10	CAMK1D	JMJD1C	General cognitive ability	Brain Hypothalamus
Chr 10	CAMK1D	JMJD1C	Educational attainment	Brain Hypothalamus
Chr 10	CAMK1D	JMJD1C	Educational attainment (years of education)	Brain Hypothalamus
Chr 10	CAMK1D	JMJD1C	Highest math class taken	Brain Hypothalamus
Chr 10	CAMK1D	JMJD1C	Lung function (FEV1/FVC)	Brain Hypothalamus
Chr 10	CAMK1D	JMJD1C	Educational attainment	Brain Hypothalamus
Chr 10	CELF2	CCDC6	Systolic blood pressure	Spleen
Chr 10	CELF2	CCDC6	Pulse pressure	Spleen
Chr 10	FAM107B	CTNNA3	Night sleep phenotypes	Brain Caudate basal ganglia; Brain Cortex; Brain Nucleus accumbens basal ganglia; Brain Putamen basal ganglia
Chr 10	FRMD4A	REEP3	Red blood cell count	Breast Mammary Tissue
Chr 10	NEBL	JMJD1C	Interleukin-10 levels	Pituitary
Chr 10	NEBL	JMJD1C	Lung function (FEV1/FVC)	Pituitary
Chr 10	PIP4K2A	CTNNA3	Breast cancer	Brain Caudate basal ganglia; Brain Cortex; Brain Nucleus accumbens basal ganglia
Chr 10	PIP4K2A	CTNNA3	Obesity-related traits	Brain Caudate basal ganglia; Brain Cortex; Brain Nucleus accumbens basal ganglia
Chr 10	PLXDC2	BICC1	Heel bone mineral density	Stomach
Chr 10	PLXDC2	BICC1	Pulse pressure	Stomach