Table 1.

Summary of the quality of sequencing data and the statistics of the transcriptome assembly.

samples	clean reads	GC content	% ≥ Q30	mapped reads	multiple map reads
25-0-1	43 219 584	55.53%	92.43%	36 434 612 (84.30%)	4 273 029 (9.89%)
25-0-2	57 834 352	56.07%	91.78%	47 992 825 (82.98%)	2 727 536 (4.72%)
25-0-3	61 653 378	55.56%	91.98%	51 148 445 (82.96%)	3 291 772 (5.34%)
25-2-1	55 764 392	55.52%	91.46%	45 602 317 (81.78%)	2 931 865 (5.26%)
25-2-2	55 515 810	54.52%	91.74%	45 293 095 (81.59%)	2 996 223 (5.40%)
25-2-3	49 870 338	55.39%	92.05%	41 000 921 (82.22%)	3 024 240 (6.06%)
25-4-1	60 499 320	55.28%	91.94%	49 312 142 (81.51%)	3 266 350 (5.40%)
25-4-2	61 702 412	55.05%	91.96%	51 115 346 (82.84%)	4 546 560 (7.37%)
25-4-3	69 395 674	55.67%	91.35%	56 124 178 (80.88%)	2 601 713 (3.75%)
11-0-1	53 942 024	56.58%	91.10%	43 361 427 (80.39%)	1 779 094 (3.30%)
11-0-2	68 461 348	56.40%	91.52%	55 243 173 (80.69%)	3 417 620 (4.99%)
11-0-3	62 525 964	55.92%	91.26%	50 368 723 (80.56%)	4 155 318 (6.65%)
11-2-1	43 221 480	54.77%	91.39%	34 915 829 (80.78%)	2 243 227 (5.19%)
11-2-2	74 234 502	55.35%	91.86%	60 514 688 (81.52%)	2 975 696 (4.01%)
11-2-3	62 994 916	55.02%	91.29%	50 799 160 (80.64%)	3 521 217 (5.59%)
11-4-1	61 814 654	53.92%	91.86%	49 175 101 (79.55%)	6 156 701 (9.96%)
11-4-2	59 057 624	53.98%	91.92%	48 432 689 (82.01%)	5 772 643 (9.77%)
11-4-3	54 019 710	53.40%	92.20%	44 750 148 (82.84%)	4 243 560 (7.86%)