Table 2.
Summary of predicted B cell epitopes present on the outer surface of the MERS-CoV, 2019-nCov, and SARS-CoV spike proteins.
| Strain | Start | End | Peptide | Length | Score | 3D Structure |
|---|---|---|---|---|---|---|
| MERS-CoV | 523 | 566 | YSPCVSIVPSTVWEDGDYYRKQLSPLEGGGWLVASGSTVAMTEQ | 44 | 0.898 | A |
| 702 | 743 | STYGPLQTPVGCVLGLVNSSLFVEDCKLPLGQSLCALPDTPS | 42 | 0.88 | B | |
| 485 | 518 | PHNLTTITKPLKYSYINKCSRLLSDDRTEVPQLV | 34 | 0.848 | C | |
| 90 | 99 | GHATGTTPQK | 10 | 0.839 | D | |
| 618 | 628 | QNCTAVGVRQQ | 11 | 0.827 | E | |
| 18 | 32 | YVDVGPDSVKSACIE | 15 | 0.801 | F | |
| 2019-nCov | 1071 | 1147 | QEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDS | 77 | 0.88 | - |
| 92 | 192 | FASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLGVNCTFEYVSFKNLREF | 67 | 0.788 | - | |
| 328 | 364 | RFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVAD | 37 | 0.767 | - | |
| 553 | 564 | TESNKKFLPFQQ | 12 | 0.721 | - | |
| SARS-CoV | 684 | 702 | DSSIAYSNNTIAIPTNFSI | 19 | 0.712 | - |
| 315 | 355 | RFPNITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVL | 41 | 0.692 | - | |
| 765 | 797 | AQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKR | 33 | 0.638 | - |