Table 4.
Optical trap step kinetics and step displacement fit parameters
| Step kinetics | Step sizes | |||||||||
| Motor | [MgATP] | Load, pN | A1 | k1, s−1 | A2 | k2, s−1 | Aback | μback, nm | Aforward | μforward, nm |
| KIF3AA | 1 mM | 1 pN hindering | 1.0 | 18 | — | — | 0.04 | −7.1 ± 4.8 | 0.96 | 8.7 ± 2.9 |
| KIF3AA | 1 mM | 1 pN assisting | 1.0 | 24 | — | — | 0.12 | −11 ± 6.4 | 0.88 | 11 ± 5.5 |
| KIF3CC | 1 mM | 1 pN hindering | 0.61 | 6.6 | 0.39 | 0.6 | 0.39 | −6.7 ± 5.2 | 0.61 | 7.8 ± 4.4 |
| KIF3CC | 1 mM | 1 pN assisting | 0.78 | 18 | 0.22 | 2.2 | 0.20 | −9.8 ± 5.1 | 0.80 | 11 ± 7.5 |
| KIF3AC | 10 μM | 1 pN hindering | 1.0 | 5.9 | — | — | 0.35 | −5.0 ± 7.2 | 0.65 | 7.8 ± 2.9 |
| KIF3AC | 1 mM | 1 pN hindering | 0.96 | 11 | 0.04 | 2.4 | 0.21 | −7.4 ± 5.0 | 0.79 | 9.2 ± 4.5 |
| KIF3AC | 1 mM | 1 pN assisting | 0.88 | 24 | 0.12 | 2.7 | 0.27 | −9.4 ± 7.4 | 0.73 | 11 ± 7.3 |
Dwell time distributions were fit by either a single exponential function or the sum of two exponential functions to determine step kinetics. Single exponential fit equation: and sum of two exponential functions fit equation: , where the amplitude A is reported as A1 and (1 – A) is reported as A2. Amplitude and rate parameters are shown. Justification of a second exponential was determined by the log-likelihood ratio test. For KIF3CC, P < 1 × 10−16 at 1-pN hindering load, and P < 1 × 10−16 at 1-pN assisting load. For KIF3AC, P < 1 × 10−16 at 1-pN hindering load, and P < 1 × 10−16 at 1-pN assisting load. Step-size distributions were fit by the sum of two Gaussian distributions. Relative amplitudes are reported; step sizes are reported as means ± σ of the fit curve, where σ indicates the width of Gaussian peak and not uncertainty in peak position.