Table 4. Basic statistical information on the reads quality.

Sample Type	Raw Reads	Clean Reads	Clean Rate	Q20	Q30
UA01	23,492,879	13,313,253	56.67%	97.48%	96.22%
UA02	18,574,469	6,555,163	35.29%	97.55%	96.29%
UA03	20,768,409	10,509,072	50.60%	97.26%	95.86%
UA04	21,044,515	7,637,951	36.29%	97.55%	96.29%
RA01	28,274,512	12,322,587	43.58%	97.39%	96.15%
RA02	13,768,858	7,798,992	56.64%	97.72%	96.58%
RA03	23,161,484	15,051,526	64.99%	97.77%	96.71%
RA04	21,394,129	13,622,523	63.67%	97.07%	95.68%
RA05	24,770,487	15,825,425	63.89%	97.61%	96.44%
RA06	12,775,494	5,689,304	44.53%	97.46%	96.19%
RA07	17,429,573	5,782,516	33.18%	97.05%	95.66%
RA08	15,384,559	9,607,274	62.45%	96.96%	95.51%
HC01	16,390,223	6,555,376	40.00%	97.22%	95.84%
HC02	23,893,885	12,144,038	50.82%	97.53%	96.32%
HC03	21,746,269	3,272,337	15.05%	97.09%	95.72%
HC04	21,904,933	3,649,431	16.66%	97.53%	96.34%