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Summary of single nucleotide polymorphisms (SNPs) and indels. Tv, transversion; Tn, transition; In/Del, insertion and deletion; LSC, large single-copy region; SSC, small single-copy region; IR, inverted repeat region; (A,B), (C,D), and (E,F) reflect differences between P. aquatica (4x) vs. P. arundinacea (6x), P. aquatica (4x) vs. P. arundinacea (4x), and P. arundinacea (6x) vs. P. arundinacea (4x), respectively.
