Table 2.
Significantly different taxa between the CD-G and CD-P groups.
| Taxa Level a | Taxonomic Assignment | W b | Group c | LDA Score d |
|---|---|---|---|---|
| Genus | p_Actinobacteria;c_Actinobacteria;o_Bifidobacteriales;f_Bifidobacteriaceae;g_Bifidobacterium | ns | CD-G | 4.4 |
| p_Firmicutes;c_Bacilli;o_Lactobacillales;f_Aerococcaceae;g_Abiotrophia | ns | CD-P | 4.2 | |
| p_Firmicutes;c_Bacilli;o_Lactobacillales;f_Enterococcaceae;g_Enterococcus | 53 | ns | ||
| p_Firmicutes;c_Bacilli;o_Lactobacillales;f_Lactobacillaceae;g_Lactobacillus | 45 | CD-P | 4.2 | |
| p_Firmicutes;c_Clostridia;o_Clostridiales;f_Lachnospiraceae;g_Blautia | 51 | CD-G | 4.5 | |
| p_Firmicutes;c_Clostridia;o_Clostridiales;f_Lachnospiraceae;g_Coprococcus | ns | CD-G | 4.2 | |
| p_Firmicutes;c_Clostridia;o_Clostridiales;f_Ruminococcaceae;g_Faecalibacterium | ns | CD-G | 4.2 | |
| p_Firmicutes;c_Clostridia;o_Clostridiales;f_Veillonellaceae;g_Selenomonas | ns | CD-P | 4.1 | |
| p_Firmicutes;c_Clostridia;o_Clostridiales;f_Veillonellaceae;g_Veillonella | 63 | CD-P | 4.0 | |
| p_Fusobacteria;c_Fusobacteriia;o_Fusobacteriales;f_Fusobacteriaceae;g_Fusobacterium | 45 | CD-G | 3.1 | |
| p_Proteobacteria;c_Gammaproteobacteria;o_Enterobacteriales;f_Enterobacteriaceae;g_Escherichia | 68 | CD-P | 4.8 | |
| p_Proteobacteria;c_Gammaproteobacteria;o_Enterobacteriales;f_Enterobacteriaceae;g_Klebsiella | 61 | CD-P | 3.9 | |
| Species | p_Actinobacteria;c_Actinobacteria;o_Bifidobacteriales;f_Bifidobacteriaceae;g_Bifidobacterium;s_adolescentis | ns | CD-G | 4.3 |
| p_Actinobacteria;c_Actinobacteria;o_Bifidobacteriales;f_Bifidobacteriaceae;g_Bifidobacterium;s_longum | ns | CD-G | 4.3 | |
| p_Actinobacteria;c_Coriobacteriia;o_Coriobacteriales;f_Coriobacteriaceae;g_Collinsella;s_aerofaciens | ns | CD-G | 4.3 | |
| p_Bacteroidetes;c_Bacteroidia;o_Bacteroidales;f_Bacteroidaceae;g_Bacteroides;s_plebeius | ns | CD-G | 4.0 | |
| p_Bacteroidetes;c_Bacteroidia;o_Bacteroidales;f_Bacteroidaceae;g_Bacteroides;s_uniformis | ns | CD-G | 4.0 | |
| p_Firmicutes;c_Bacilli;o_Lactobacillales;f_Streptococcaceae;g_Streptococcus;s_luteciae | ns | CD-P | 4.2 | |
| p_Firmicutes;c_Clostridia;o_Clostridiales;f_Veillonellaceae;g_Veillonella;s_dispar | 92 | CD-P | 4.3 | |
| p_Firmicutes;c_Clostridia;o_Clostridiales;f_Lachnospiraceae;g_Blautia;s_producta | ns | CD-G | 4.1 | |
| p_Firmicutes;c_Clostridia;o_Clostridiales;f_Ruminococcaceae;g_Faecalibacterium;s_prausnitzii | ns | CD-G | 4.5 | |
| p_Proteobacteria;c_Gammaproteobacteria;o_Enterobacteriales;f_Enterobacteriaceae;g_Escherichia;s_coli | 96 | CD-P | 4.9 |
a number of genus: 314, number of species: 459. b W by ANCOM analysis. c The group showing high abundance, by LDA effect size (LEfSe) analysis. d LDA score by LEfSe analysis. c_ = class; CD-G = good prognosis group; CD-P = poor prognosis group; f_ = family; g_ = genus; LDA = linear discriminant analysis; ns = not significant; o_ = order; p_ = phylum; s_ = specie.