Skip to main content
. 2020 Jul 13;15(7):e0235799. doi: 10.1371/journal.pone.0235799

Table 1. Genotyping primers and conditions.

Allele Genotyping Primers Annealing Temperature Amplicon Size
Chd3-flox Forward (F): 5’-GGGTGGAGGTGGAAAGTGTA-3’ 55°C Wildtype: 152 bp
Reverse (R1): 5’-AGAGGACAGGTCACAGGACAA-3’ Floxed: 213 bp
Chd3Δ Forward (F): 5’-GGGTGGAGGTGGAAAGTGTA-3’ 59°C ~230 bp
Reverse (R2): 5’-GGCACAGCTTCTCTGAGACC-3’
Chd4-flox Forward: 5’-TCCAGAAGAAGACGGCAGAT-3’ 55°C Wildtype: 278 bp
Reverse: 5’- CTGGTCATAGGGCAGGTCTC-3’ Floxed: 400 bp
Chd4Δ Forward: 5’-TCCAGAAGAAGACGGCAGAT-3’ 59°C ~350 bp
Reverse: 5’-CAGCGTGTCAGAGTTTGCAT-3’
Tie2-Cre Forward: 5’-GGGAAGTCGCAAAGTTGTGAGTTG-3’ 60°C 533 bp
Reverse: 5’-TCCATGAGTGAACGAACCTGGTCG-3’
Sox2-Cre Forward: 5’-TGCAACGAGTGATGAGGTTC-3’ 58°C 528 bp
Reverse: 5’-ATTCTCCCACCGTCAGTACG-3’
FLPe Forward: 5’-AGTAGTGATCAGGTATTGCTGTTATCTG-3’ 60°C 100 bp
Reverse: 5’-GACTAATGTTGTGGGAAATTGGAG-3’