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. Author manuscript; available in PMC: 2020 Aug 1.
Published in final edited form as: Nat Methods. 2019 Dec 2;17(2):137–145. doi: 10.1038/s41592-019-0654-x

Figure 3: Bioconductor workflow for analyzing single-cell data.

Figure 3:

A typical analytical workflow using Bioconductor leads to the creation and evolution of a SingleCellExperiment (or sce) object during data processing and downstream statistical analysis (left column). An example of a sce object evolving throughout the course of a workflow is shown, including visualization, analysis, and annotation (right column).