Table 1.
Purpose | Measure | Commonly used techniques | D* | References | |
---|---|---|---|---|---|
T1: Visualization and descriptive analysis | Transformation of locational information into geographic coordinates | Geocoding/georeferencing | GIS based geocoding of street address, postal code, or administrative divisions | pp, pr, ar | (29–31) |
T2: Spatial/Spatiotemporal dependence and pattern recognition | Visualization and description of the size and shape of the spatial distribution | Exploratory spatial data analysis | Mean center | pp, pr, ar | (32) |
Median center | (32) | ||||
Convex hull | (33) | ||||
Standard deviation (weighted by attributes) | (32) | ||||
Directional mean and variance | (34) | ||||
Moran scatter plot | (35) | ||||
Characterize nearby features | Features with in a distance band/buffer zone | pr, ar | (31, 36) | ||
Distance to feature | (31) | ||||
Overlaying features | (31) | ||||
Test whether there is spatial dependence in the event data | Spatial autocorrelation | Global Moran's I | pr, ar | (37) | |
Geary's C | (38) | ||||
Mantel test | (39) | ||||
Geti's ord | (40, 41) | ||||
Spatial autocorrelation among regression residuals | Moran's I test | pr, ar | (42, 43) | ||
Kelejian–Robinson test | (44, 45) | ||||
Distance analysis | Nearest neighbor analysis | (46) | |||
Ripley's K | (47, 48) | ||||
Distance matrices | (31) | ||||
Measure the uneven distribution of the populations and risk factors | Local or stratified spatial heterogeneity | Getis Ord Gi* | pr, ar | (40, 41) | |
K-means clustering | (49) | ||||
Anselin's local Moran's I (L-Moran) | (50) | ||||
Spatial stratified heterogeneity test | (51) | ||||
Measure the spatial dependence while accounting for background population | Oden's Ipop | ar | [(52, 53); https://www.biomedware.com] | ||
Test whether there is any spatial trends | Testing for first-order effects | Trend analysis | pr, ar | (18, 54, 55) | |
Test whether there is any spatial clustering in the data | Global cluster detection | Nearest neighbor test | pp, pr, ar | (46) | |
Cuzick and Edward's test (case-control data) | (56) | ||||
Local indicators of spatial association (LISA) | (50) | ||||
Locate the clusters and the statistical significance of the clustering | Purely spatial local cluster detection | Spatial scan statistics Flexscan |
ar | (57–59) (60) |
|
Turnbull's test | pr, ar | (61) | |||
Besag and Newell's test | (62) | ||||
Test whether there is space and time clustering in the data | Spatiotemporal cluster detection | Knox test | pp, pr, ar | (63) | |
Mantel test | (39) | ||||
Barton's test | (64) | ||||
kth nearest neighbor test for time-space interaction | (65) | ||||
Space-time permutation scan statistic | (66, 67) | ||||
Edrer-Myers-Mantel test | (68, 69) | ||||
Detect the direction of progression of an event over time | Spatiotemporal directionality | Spatiotemporal directionality test | pr, ar | [(53, 70); https://www.biomedware.com] | |
Spatiotemporal anisotropy parameter | (71, 72) | ||||
T3: Spatial smoothing and interpolation | Quantifying spatial variations in event intensity: spatial point pattern (SPP) intensity | Density based point pattern recognition | Univariate Kernel density estimation (KDE) | pr | (73–75) |
Multidimensional KDE | (76, 77) | ||||
Empirical Bayes smoothing (EBS) | ar | (78, 79) | |||
Smoothing and interpolation | Deterministic spatial interpolation | Thiessen (Voronoi) polygons | pr | (80) | |
Neighborhood matrices | (31) | ||||
Inverse Distance Estimation (IDW) | (32, 81, 82) | ||||
Triangulated Irregular Network (TIN) | (83, 84) | ||||
Headbang smoothing | (85–87) | ||||
Spatial modeling with stochastic partial differential equations (SPDE) | pr | (88, 89) | |||
Geostatistical interpolation and spatial regression | Kriging | pr | (32, 90, 91) (92) (93–96) |
||
Spline regression models | |||||
Trend Surface Interpolation | |||||
Multivariate spatial interpolation | Co-kriging | pr | (32, 91, 97) (98–100) |
||
Regression kriging | |||||
Spatiotemporal interpolation | Space-time kriging | pr | (101, 102) (103) |
||
Autoregressive spatial smoothing and temporal Spline smoothing | |||||
T4: Geographic correlation studies: modeling and regression | Estimate the probability of disease spread using explanatory variables | Regression at spatial units | Ordinary least square regression and test for spatial autocorrelation of residuals | pp, pr, ar | (42, 43, 45) |
Spatial lag model with independent variable representing neighbors | (104, 105) | ||||
Spatial and spatiotemporal error autoregression models for areal data (When regression residuals have spatial autocorrelation) | Simultaneous autoregressive (SAR) models | pr, ar | (19, 24, 106) | ||
Geographically weighted regression (GWR) | (107, 108) | ||||
Purely spatial: Conditional autoregressive (CAR) models | (19, 109, 110) | ||||
Spatiotemporal CAR models | (111, 112) | ||||
Two-stage space-time mixture modeling | (113) | ||||
Latent structure models | (113–115) | ||||
Spatial and spatiotemporal models for point-level data | Point process models with weighted sum approximation | pp | (116, 117) | ||
Conditional logistic model | pp, pr | (118, 119) | |||
Separable models for spatiotemporal data | (19) | ||||
Non-separable models for spatiotemporal | (19) | ||||
Measure the gravitation of adverse effects and the risk factors based on distance | Estimate most probable spatial interactions between entities | Gravity models | pr, ar | (120–123) | |
Analysis of spatially explicit time-to-event data | Spatial survival models | Spatial cure rate model | pr | (124) | |
Frailty models | (124) | ||||
Estimate the probability of disease when the disease occurrence is correlated with environmental variables | Environmental/Ecological niche modeling | Maximum Entropy Ecological Niche modeling (Maxent) | pr | (125–127) | |
Genetic Algorithm for Rule Set Production (GARP) | (128–130) | ||||
Machine/statistical learning techniques | Random forest | pr | (131, 132) | ||
Generalized additive models (GAMs) | (133–135) | ||||
Artificial neural networks (ANN) | (136, 137) |
D* Column represents the type of data primarily applicable on the set of tools, where, pp, point-pattern; pr, point-referenced; ar, areal data.