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. 2020 Jul 7;7:339. doi: 10.3389/fvets.2020.00339

Table 1.

A summary of types of common spatial analytical tools and their purpose.

Purpose Measure Commonly used techniques D* References
T1: Visualization and descriptive analysis Transformation of locational information into geographic coordinates Geocoding/georeferencing GIS based geocoding of street address, postal code, or administrative divisions pp, pr, ar (2931)
T2: Spatial/Spatiotemporal dependence and pattern recognition Visualization and description of the size and shape of the spatial distribution Exploratory spatial data analysis Mean center pp, pr, ar (32)
Median center (32)
Convex hull (33)
Standard deviation (weighted by attributes) (32)
Directional mean and variance (34)
Moran scatter plot (35)
Characterize nearby features Features with in a distance band/buffer zone pr, ar (31, 36)
Distance to feature (31)
Overlaying features (31)
Test whether there is spatial dependence in the event data Spatial autocorrelation Global Moran's I pr, ar (37)
Geary's C (38)
Mantel test (39)
Geti's ord (40, 41)
Spatial autocorrelation among regression residuals Moran's I test pr, ar (42, 43)
Kelejian–Robinson test (44, 45)
Distance analysis Nearest neighbor analysis (46)
Ripley's K (47, 48)
Distance matrices (31)
Measure the uneven distribution of the populations and risk factors Local or stratified spatial heterogeneity Getis Ord Gi* pr, ar (40, 41)
K-means clustering (49)
Anselin's local Moran's I (L-Moran) (50)
Spatial stratified heterogeneity test (51)
Measure the spatial dependence while accounting for background population Oden's Ipop ar [(52, 53); https://www.biomedware.com]
Test whether there is any spatial trends Testing for first-order effects Trend analysis pr, ar (18, 54, 55)
Test whether there is any spatial clustering in the data Global cluster detection Nearest neighbor test pp, pr, ar (46)
Cuzick and Edward's test (case-control data) (56)
Local indicators of spatial association (LISA) (50)
Locate the clusters and the statistical significance of the clustering Purely spatial local cluster detection Spatial scan statistics
Flexscan
ar (5759)
(60)
Turnbull's test pr, ar (61)
Besag and Newell's test (62)
Test whether there is space and time clustering in the data Spatiotemporal cluster detection Knox test pp, pr, ar (63)
Mantel test (39)
Barton's test (64)
kth nearest neighbor test for time-space interaction (65)
Space-time permutation scan statistic (66, 67)
Edrer-Myers-Mantel test (68, 69)
Detect the direction of progression of an event over time Spatiotemporal directionality Spatiotemporal directionality test pr, ar [(53, 70); https://www.biomedware.com]
Spatiotemporal anisotropy parameter (71, 72)
T3: Spatial smoothing and interpolation Quantifying spatial variations in event intensity: spatial point pattern (SPP) intensity Density based point pattern recognition Univariate Kernel density estimation (KDE) pr (7375)
Multidimensional KDE (76, 77)
Empirical Bayes smoothing (EBS) ar (78, 79)
Smoothing and interpolation Deterministic spatial interpolation Thiessen (Voronoi) polygons pr (80)
Neighborhood matrices (31)
Inverse Distance Estimation (IDW) (32, 81, 82)
Triangulated Irregular Network (TIN) (83, 84)
Headbang smoothing (8587)
Spatial modeling with stochastic partial differential equations (SPDE) pr (88, 89)
Geostatistical interpolation and spatial regression Kriging pr (32, 90, 91)
(92)
(9396)
Spline regression models
Trend Surface Interpolation
Multivariate spatial interpolation Co-kriging pr (32, 91, 97)
(98100)
Regression kriging
Spatiotemporal interpolation Space-time kriging pr (101, 102)
(103)
Autoregressive spatial smoothing and temporal Spline smoothing
T4: Geographic correlation studies: modeling and regression Estimate the probability of disease spread using explanatory variables Regression at spatial units Ordinary least square regression and test for spatial autocorrelation of residuals pp, pr, ar (42, 43, 45)
Spatial lag model with independent variable representing neighbors (104, 105)
Spatial and spatiotemporal error autoregression models for areal data (When regression residuals have spatial autocorrelation) Simultaneous autoregressive (SAR) models pr, ar (19, 24, 106)
Geographically weighted regression (GWR) (107, 108)
Purely spatial: Conditional autoregressive (CAR) models (19, 109, 110)
Spatiotemporal CAR models (111, 112)
Two-stage space-time mixture modeling (113)
Latent structure models (113115)
Spatial and spatiotemporal models for point-level data Point process models with weighted sum approximation pp (116, 117)
Conditional logistic model pp, pr (118, 119)
Separable models for spatiotemporal data (19)
Non-separable models for spatiotemporal (19)
Measure the gravitation of adverse effects and the risk factors based on distance Estimate most probable spatial interactions between entities Gravity models pr, ar (120123)
Analysis of spatially explicit time-to-event data Spatial survival models Spatial cure rate model pr (124)
Frailty models (124)
Estimate the probability of disease when the disease occurrence is correlated with environmental variables Environmental/Ecological niche modeling Maximum Entropy Ecological Niche modeling (Maxent) pr (125127)
Genetic Algorithm for Rule Set Production (GARP) (128130)
Machine/statistical learning techniques Random forest pr (131, 132)
Generalized additive models (GAMs) (133135)
Artificial neural networks (ANN) (136, 137)

D* Column represents the type of data primarily applicable on the set of tools, where, pp, point-pattern; pr, point-referenced; ar, areal data.