TABLE 3.
Primers and probes used in AR gene pool quantification.
| Primer and probe | Sequence (5′-3′) | References |
| blaCMY–2 FP | GCCGTTGATGATCGAATC | Zhang et al., 2013 |
| blaCMY–2 RP | GCGTATTGGCGATATGTAC | |
| blaCMY–2 probe | 6FAM-AGTTCAGCATCTCCCAGCCTAATCC-BHQ1 | |
| tetS FP | GTATGTTCATCTTTCTAAG | Li and Wang, 2010 |
| tetS RP | GCAATAACATCTTTTCAAC | |
| tetS probe | 6FAM-CCATGTGTCCAGGAGTATCTAC-BHQ1 | |
| tetL FP | CGTCTCATTACCTGATATTGC | |
| tetL RP | AGGAGTAACCTTTTGATGCC | |
| tetL probe | 6FAM-AACCACCTGCGAGTACAAACTGG-BHQ1 | |
| tetM FP | GAACATCGTAGACACTCAATTG | |
| tetM RP | CAAACAGGTTCACCGG | |
| tetM probe | 6FAM-CGGTGTATTCAAGAATATCGTAGTG-BHQ1 | |
| sul1 FP | CACCTTCGACCCGAAG | Zhang, 2012 (Unpublished data) |
| sul1 RP | TTGAAGGTTCGACAGCACG | |
| sul1 probe | 6FAM-TCGACGAGATTGTGCGGTTCTTCG-BHQ1 | |
| sul2 FP | GATATTCGCGGTTTTCCAGA | |
| sul2 RP | CAAAGAACGCCGCAATGT | |
| sul2 probe | 6FAM-ATCATCTGCCAAACTCGTCGTTATGC-BHQ1 | |
| 16s FP | TCCTACGGGAGGCAGCAGT | Nadkarni et al., 2002 |
| 16s RP | GGACTACCAGGGTATCTAATCCTGTT | |
| 16s probe | 6FAM-CGTATTACCGCGGCTGCTGGCAC-BHQ1 |
FP, forward primer; RP, reversed primer.