Table 1.
Parent | Sample | ddPCR | Amplicon-based NGS | qPCR |
---|---|---|---|---|
father of proband 12 | blood | 18.5% | rs6727415: 13.9% (A 1259, G 910) | Not tested |
rs1234405: 17.3%(A 1444, C 943) | ||||
rs1234413: 15.9% (C 1203, T 820) | ||||
Average VAF: 15.7% | ||||
father of proband 26 | blood | undetectable | rs1023367: 7.3% (C 1162, T 993) | 0.39% |
rs8132955: 2.3% (A 636, T 607) | ||||
rs218652: 0.7% (A 1470, G 1450) | ||||
father of proband 32 | blood | 6.2% | no informative SNPs | Not tested |
mother of proband 38 | blood | 15.6% | no informative SNPs | Not tested |
buccal | 10.6% | |||
saliva | 8.2% | |||
urine | undetectable |
The scale and levels of low-level parental somatic mosaicism are incompletely understood.
We propose an approach for more effective detection of low-level parental somatic mosaicism for CNV deletions for a more accurate assessment and estimate of disease recurrence risk.