Table 1. Main features of the chloroplast genomes generated in this study.
Species | Section | Total length (bp) | LSC (bp) | SSC (bp) | IR (bp) | GC% | # of coding loci | # of tRNA loci | # of rRNA loci | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Total | LSC | SSC | IR | |||||||||
Acer acuminatum | Arguta | 155,548 | 85,358 | 18,046 | 26,072 | 37.9 | 36.1 | 32.1 | 42.9 | 89 | 38 | 8 |
Acer carpinifolium | Indivisa | 155,212 | 85,448 | 17,724 | 26,020 | 38.0 | 36.2 | 32.5 | 43.0 | 89 | 38 | 8 |
Acer glabrum | Glabra | 156,373 | 86,034 | 18,211 | 26,064 | 37.9 | 36.0 | 32.2 | 42.9 | 89 | 38 | 8 |
Acer maximowiczianum | Trifoliata | 156,082 | 85,865 | 18,147 | 26,035 | 37.9 | 36.1 | 32.3 | 42.9 | 89 | 38 | 8 |
Acer micranthum | Macrantha | 156,399 | 86,147 | 18,128 | 26,062 | 37.9 | 36.0 | 32.1 | 42.9 | 89 | 38 | 8 |
Acer negundo | Negundo | 155,938 | 85,678 | 18,092 | 26,084 | 37.9 | 36.1 | 32.3 | 42.9 | 89 | 38 | 8 |
Acer nipponicum | Parviflora | 156,225 | 85,823 | 18,232 | 26,085 | 37.8 | 35.9 | 32.0 | 42.9 | 89 | 38 | 8 |
Acer oblongum | Oblonga | 155,686 | 85,665 | 17,821 | 26,100 | 38.0 | 36.1 | 32.4 | 42.9 | 89 | 38 | 8 |
Acer palmatum var. palmatum | Palmata | 157,023 | 85,342 | 18,167 | 26,757 | 37.9 | 36.0 | 32.2 | 42.8 | 90 | 38 | 8 |
Acer pentaphyllum | Pentaphylla | 156,220 | 85,938 | 18,148 | 26,067 | 37.9 | 36.0 | 32.3 | 42.9 | 89 | 38 | 8 |
Acer pilosum | Pubescentia | 155,586 | 85,313 | 18,139 | 26,067 | 38.0 | 36.2 | 32.1 | 42.9 | 89 | 38 | 8 |
Acer platanoides | Platanoidea | 156,385 | 86,098 | 18,107 | 26,090 | 37.9 | 36.0 | 32.1 | 42.9 | 89 | 38 | 8 |
Acer pseudoplatanus | Acer | 155,933 | 85,812 | 17,971 | 26,075 | 37.9 | 36.1 | 32.2 | 42.9 | 89 | 38 | 8 |
Acer rubrum | Rubra | 155,683 | 85,383 | 18,086 | 26,107 | 37.9 | 36.1 | 32.2 | 42.9 | 89 | 38 | 8 |
Acer sterculiaceum subsp. sterculiaceum | Lithocarpa | 156,258 | 86,014 | 18,048 | 26,098 | 38.0 | 36.1 | 32.3 | 42.9 | 89 | 38 | 8 |
Acer tataricum subsp. ginnala | Ginnala | 155,667 | 85,404 | 18,061 | 26,101 | 38.0 | 36.2 | 32.4 | 42.9 | 89 | 38 | 8 |
Notes.
- IR
- inverted repeat
- LSC
- large single copy
- SSC
- small single copy