Table 3. List of most variable regions in Acer plastomes.
| Region | Length (bp) | Aligned length (bp) | No. of variable (polymorphic) sites | No. of parsimony- informative sites |
|---|---|---|---|---|
| ycf1 (SSC portion) | 4205–4282 | 4361 | 423 (9.7%) | 93 (2.1%) |
| ycf1 (whole) | 5484–5541 | 5673 | 438 (7.7%) | 99 (1.7%) |
| ndhF–rpl32+rpl32+ | 1529–2061 | 2453 | 146 (5.9%) | 42 (1.7%) |
| rpl32–trnL-UAG | ||||
| rpl32–trnL-UAG | 833–1159 | 1334 | 98 (7.3%) | 30 (2.2%) |
| trnT-GGU–psbD | 1454–1511 | 1565 | 119 (7.6%) | 21 (1.3%) |
| trnK-UUU–rps16 | 776–1022 | 1127 | 118 (10.5%) | 22 (1.6%) |
| atpH–atpI | 1117–1178 | 1274 | 103 (8.1%) | 14 (1.1%) |
| trnE-UUC–trnT-GGU | 761–818 | 866 | 95 (11%) | 18 (2.1%) |
| ccsA+ccsA–ndhD | 1150–1162 | 1173 | 93 (7.9%) | 24 (2.0%) |
| ccsA–ndhD | 193–205 | 216 | 36 (16.7%) | 19 (8.8%) |
| rpoB–trnC-GCA | 1161–1189 | 1265 | 92 (7.3%) | 15 (1.2) |
| ndhC–trnV-UAC | 884–927 | 1040 | 84 (8.1%) | 39 (3.75) |
| atpI–rps2+rps2 +rps2–rpoC2 | 790–1195 | 1243 | 76 (6.1%) | 18 (1.4%) |
| petN–psbM | 762–796 | 867 | 73 (8.4%) | 15 (1.7%) |
| psbZ–trnG-GCC | 516–604 | 685 | 71 (10.4%) | 27 (3.9%) |
| rps16–trnQ-UUG | 783–1120 | 1252 | 66 (5.3%) | 13 (1.0%) |
| accD–psaI | 607–707 | 759 | 59 (7.8%) | 8 (1.0%) |
| trnH-GUG–psbA | 272–435 | 529 | 52 (9.8%) | 7 (1.3%) |