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. Author manuscript; available in PMC: 2020 Jul 17.
Published in final edited form as: Can J Microbiol. 2010 Feb;56(2):168–177. doi: 10.1139/w09-123

Table 3.

In vivo and in vitro termination efficiencies of the λtI+ and its λtI deletions quantified by transcripts.

Terminator or deletion galK RNA level* % in vivo termination % in vitro termination
Without terminator 52.0 0 nd
Wild λtI terminator 1.0 98 65
tIΔ3′+32 4.0 92 38
tIΔ3′+22 3.6 93 nd
tIΔ3′·+3 13.4 74 39
tIΔ3′−9 52.1 0 18
tIΔ3′−15 52.3 0 18
tIΔ3′−34 52.3 0 nd
tIΔ5′−106 3.1 94 nd
tIΔ5−92 4.3 92 31
tIΔ5′−64 9.9 81 13
tIΔ5′−37 10.6 80 14
tIΔ5−32 29.2 44 14
tIΔ5′−31 41.1 21 nd

Note: nd, not determined.

*

Measurements are the average of 3 different pairs of autoradiograms in which galK RNA is normalized to β-lactamase RNA levels. pMC and pMS series were used.

Percent in vivo termination was calculated by subtracting galK RNA levels for thevarious tI derivatives from the pKG1800 control, lacking a terminator, then dividingby the units found for pKG1800 and multiplying by 100%.

Percent in vitro termination was calculated as follows: (counts per minute of terminated transcript × 100)/(counts per minute of terminated transcript + counts per minute of nonterminated transcript); 1 cpm = 0.0167 Bq. The pBS series was used.