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[Preprint]. 2020 Feb 25:3541361. [Version 1] doi: 10.2139/ssrn.3541361

Table 2.

Dominant SARS-CoV B cell epitope regions

SARS 2019 nCoV

Sequence Max RF Sequence Proteina Mapped Start-End Identity (%)

DAVDCSQNPLAELKCSVKSFEIDKGIYQTSNF 0.504 DAVDCALDPLSETKCTLKSFTVEKGIYQTSN S 287-317 69
VCGPKLSTDLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVIT 0.745 VCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVI S 524-598 80
GTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNN 0.709 GTNTSNQVAVLYQDVNCTEVPVAIHADQLTPTWRVYSTGS s 601-640 78
FSQILPDPLKPTKRSFIED 0.365 FSQILPDPSKPSKRSFIE s 802-819 89
FGAGAALQIPFAMQMAYRFNGIG 0.367 FGAGAALQIPFAMQMAYRFNGI s 888-909 100

MADNGTITVEELKQLLEQWNLVIG 0.460 MADSNGTITVEELKKLLEQWNLVI M 1-24 92
PLMESELVIGAVIIRGHLRMA 0.457 PLLESELVIGAVILRGHLRI M 132-151 90

PQGLPNNTASWFTALTQHGKEE 0.537 RPQGLPNNTASWFTALTQHGK N 42-62 95
NNAATVLQLPQGTTLPKGFYA 0.543 NNNAATVLQLPQGTTLPKGF N 153-172 95
KHIDAYKTFPPTEPKKDKKKKTDEAQPLPQRQKKQPTVTLLPAADMDD 0.82 NKHIDAYKTFPPTEPKKDKKKKTDEAQPLPQRQKKQPTVTLLPAADM N 355-401 90
a.

S= surface glycoprotein; M=membrane protein; N=nucleocapsid phosphoprotein