Table 2.
Dominant SARS-CoV B cell epitope regions
SARS | 2019 nCoV | ||||
---|---|---|---|---|---|
Sequence | Max RF | Sequence | Proteina | Mapped Start-End | Identity (%) |
DAVDCSQNPLAELKCSVKSFEIDKGIYQTSNF | 0.504 | DAVDCALDPLSETKCTLKSFTVEKGIYQTSN | S | 287-317 | 69 |
VCGPKLSTDLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVIT | 0.745 | VCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVI | S | 524-598 | 80 |
GTNASSEVAVLYQDVNCTDVSTAIHADQLTPAWRIYSTGNN | 0.709 | GTNTSNQVAVLYQDVNCTEVPVAIHADQLTPTWRVYSTGS | s | 601-640 | 78 |
FSQILPDPLKPTKRSFIED | 0.365 | FSQILPDPSKPSKRSFIE | s | 802-819 | 89 |
FGAGAALQIPFAMQMAYRFNGIG | 0.367 | FGAGAALQIPFAMQMAYRFNGI | s | 888-909 | 100 |
MADNGTITVEELKQLLEQWNLVIG | 0.460 | MADSNGTITVEELKKLLEQWNLVI | M | 1-24 | 92 |
PLMESELVIGAVIIRGHLRMA | 0.457 | PLLESELVIGAVILRGHLRI | M | 132-151 | 90 |
PQGLPNNTASWFTALTQHGKEE | 0.537 | RPQGLPNNTASWFTALTQHGK | N | 42-62 | 95 |
NNAATVLQLPQGTTLPKGFYA | 0.543 | NNNAATVLQLPQGTTLPKGF | N | 153-172 | 95 |
KHIDAYKTFPPTEPKKDKKKKTDEAQPLPQRQKKQPTVTLLPAADMDD | 0.82 | NKHIDAYKTFPPTEPKKDKKKKTDEAQPLPQRQKKQPTVTLLPAADM | N | 355-401 | 90 |
S= surface glycoprotein; M=membrane protein; N=nucleocapsid phosphoprotein