Table 2.

Short double-stranded region of the terminator hairpin of malM-3′ RNA is sufficient for binding by the ProQ NTD

	K d [nM]
32P-RNA	NTD
malM-3′	12 ± 4.8a
malM-3′-bulge	9.0 ± 2.5
malM-3′-AA	6.6 ± 1.4
malM-3′-UU	8.7 ± 2.1
malM-3′-4bp	8.8 ± 2.4
malM-3′-3bp	8.7 ± 2.4
malM-3′-2bp	6.4 ± 2
malM-3′-1bp	>1000

The K_d values were obtained by fitting the data using the quadratic equation. The average K_d values with standard deviations were calculated from three or four independent experiments, except for malM-3′ (eleven replicates).

^aData from Table 1.