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. 2020 Jun 2;48(13):7135–7153. doi: 10.1093/nar/gkaa460

Table 2.

Primers for RT-PCR and ChIP-PCR

Name Primer sequences T a (°C)
L19 Fw, 5′- GGACAGAGTCTTGATGATCTC -3′ 57
Rev, 5′- CTGAAGGTCAAAGGGAATGTG -3′
Ppia Fw, 5′- GCCATGGTCAACCCCACCGT -3′ 57
Rev, 5′- TGCAAACAGCTCGAAGGAGACG -3′
Major satellite Fw, 5′- GACGACTTGAAAAATGACGAAATC -3′ 57
Rev, 5′- CATATTCCAGGTCCTTCAGTGTGC -3′
Minor satellite Fw, 5′- CATGGAAAATGATAAAAACC -3′ 57
Rev, 5′- CATCTAATATGTTCTACAGTGTGG -3′
Line1 Fw, 5′- TTTGGGACACAATGAAAGCA -3′ 60
Rev, 5′- CTGCCGTCTACTCCTCTTGG -3′
SineB1 Fw, 5′- GTGGCGCACGCCTTTAATC -3′ 60
Rev, 5′- GACAGGGTTTCTCTGTGTAG -3′
IAP Fw, 5′- AGCAGGTGAAGCCACTG -3′ 62
Rev, 5′- CTTGCCACACTTAGAGC -3′
Gapdh Fw, 5′- AGTGCCAGCCTCGTCCCGTA -3′ 57
Rev, 5′- AGGCGCCCAATACGGCCAAA -3′
rDNA Fw, 5′- GTAGTCGCCGTGCCTACCAT -3′ 60
Rev, 5′- TTTTCGTCACTACCTCCCCG -3′

IAP, intracisternal A particle. Ta, annealing temperature.