Table 2.
Precise annotations of the Dermacentor silvarum mt genome
| Gene | Strand | Start | End | Length |
|---|---|---|---|---|
| tRNA-Met | (+) | 1 | 67 | 67 |
| ND2 | (+) | 68 | 1028 | 961 |
| tRNA-Trp | (+) | 1029 | 1091 | 63 |
| tRNA-TyrAS | (+) | 1092 | 1149 | 58 |
| COI | (+) | 1150 | 2686 | 1537 |
| COII | (+) | 2687 | 3359 | 673 |
| tRNA-Lys | (+) | 3360 | 3429 | 70 |
| tRNA-Asp | (+) | 3430 | 3491 | 62 |
| ATP8/6 | (+) | 3492 | 4326 | 835 |
| COIII | (+) | 4327 | 5104 | 778 |
| tRNA-Gly | (+) | 5105 | 5171 | 67 |
| ND3 | (+) | 5172 | 5511 | 340 |
| tRNA-Ala | (+) | 5512 | 5576 | 65 |
| Intergenic | (+) | 5577 | 5578 | 2 |
| tRNA-Arg | (+) | 5579 | 5640 | 62 |
| tRNA-Asn | (+) | 5641 | 5708 | 68 |
| Intergenic | (+) | 5709 | 5712 | 4 |
| tRNA-Ser | (+) | 5713 | 5769 | 57 |
| tRNA-Glu | (+) | 5770 | 5834 | 65 |
| R2 | * | 5825 | 5987 | 163 |
| HAS1 | (+) | 5835 | 9258 | 3424 |
| tRNA-Ile | (+) | 9259 | 9322 | 64 |
| HAS2 | (+) | 9323 | 12,930 | 3608 |
| tRNA-Thr | (+) | 12,931 | 12,991 | 61 |
| tRNA-ProAS/ND6 | (+) | 12,992 | 13,503 | 512 |
| Cytb | (+) | 13,504 | 14,585 | 1082 |
| tRNA-Ser | (+) | 14,586 | 14,652 | 67 |
| tRNA-LeuAS/CR2 | (+) | 14,653 | 15,023 | 371 |
| CR2 | * | 14,717 | 15,023 | 307 |
| tRNA-Cys | (+) | 15,024 | 15,086 | 63 |
| Intergenic | (+) | 15,087 | 15,094 | 8 |
| tRNA-Tyr | (−) | 1090 | 1151 | 62 |
| LAS1 | (−) | 1152 | 5984 | 4833 |
| ND1 | (−) | 5985 | 6903 | 919 |
| tRNA-Leu | (−) | 6904 | 6964 | 61 |
| 16S rRNA | (−) | 6965 | 8185 | 1221 |
| tRNA-Val | (−) | 8186 | 8247 | 62 |
| 12S rRNA | (−) | 8248 | 8949 | 702 |
| CR1 | (−) | 8950 | 9258 | 309 |
| tRNA-IleAS | (−) | 9259 | 9323 | 65 |
| tRNA-Gln | (−) | 9324 | 9390 | 67 |
| R1 | (−) | 9391 | 9559 | 169 |
| tRNA-Phe | (−) | 9560 | 9620 | 61 |
| ND5 | (−) | 9621 | 11,275 | 1655 |
| tRNA-His | (−) | 11,276 | 11,341 | 66 |
| ND4/4 L | (−) | 11,342 | 12,928 | 1587 |
| tRNA-ThrAS | (−) | 12,929 | 12,991 | 63 |
| tRNA-Pro | (−) | 12,992 | 13,055 | 64 |
| LAS2 | (−) | 13,056 | 14,654 | 1599 |
| tRNA-Leu | (−) | 14,655 | 14,716 | 62 |
| LAS3 | (−) | 14,717 | 1089 | 1467 |
This reference sequence is available at the NCBI GenBank database under the accession number MN347015. J(+) and N(−) represent the major and minor coding strands of the mt genome, respectively. Control Region 1 (CR1) and tandem Repeat 1 (R1) were annotated as full-length RNAs cleaved from the minor coding strand (N-strand) primary transcript, whereas CR2 and R2 were annotated as DNA regions (*). The “AS” suffix represents antisense. H-strand Antisense Segment 1 (HAS 1) represents R2/ND1AS/tRNALeuAS/(16S rRNA)AS/tRNAValAS/(12S rRNA)AS/CR1. HAS2 represents tRNAGlnAS/R1/tRNAPheAS/ND5AS/tRNAHisAS/(ND4/4 L)AS. L-strand Antisense Segment 1 (LAS1) represents COIAS/COIIAS/tRNALysAS/tRNA-AspAS/(ATP8/6)AS/COIIIAS/tRNAGlyAS/ND3AS/tRNAAlaAS/tRNAArgAS/tRNAAsnAS/tRNASerAS/tRNAGluAS/R2. LAS2 represents ND6AS/CytbAS/tRNASerAS. LAS3 represents CR2/tRNACysAS/tRNAMetAS/ND2AS/tRNATrpAS