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. 2019 Apr 29;220(6):1049–1060. doi: 10.1093/infdis/jiz217

Table 1.

List of Lamininmur-Binding Protein Spots Identified From the Outer Membrane Fraction by LC-MS/MS Analysis

Protein Spot No. Protein Description and Function Gene GenBank Accession Numbera Molecular Weight (Da)b pIb Score Sequence Coverage (%)
L1c Elongation factor thermal unstable (EF-Tu) tufA d EDJ92442 43297.31 5.26 113 25
L2c Protein D, glycerophosphoryl diester phosphodiesterase (PD) hpd e EDJ92229 41873.98 6.51 153 29
L3c l-lactate dehydrogenase (LDH) ldh e EDJ92617 41873.32 6.55 221 36
L4 Lipoprotein E, NADP phosphatase (P4) hel EDJ92235 30501.34 8.98 316 29
L5c Peptidoglycan-associated outer membrane lipoprotein P6 (P6) hp6 e EDJ93375 16107.91 6.09 210 38
L6c 30S ribosomal protein S6 (Rib30s) rpaF EDJ92478 14484.32 5.46 192 58

Abbreviations: LC-MS/MS, liquid chromatography-tandem mass spectrometry; NTHi, nontypeable Haemophilus influenzae; ORF, open reading frame.

aAccession number indicated is based upon the NTHi 3655 annotated genome database.

bMolecular weight and pI of each protein is predicted using Protparam tool (https://web.expasy.org/protparam/).

cFull-length ORFs were cloned into pET26(b)+ for expression of His-tagged recombinant proteins in Escherichia coli BL21 (DE3) followed by purification.

dEF-Tu is encoded by 2 alleles tufA (EDJ92442) and tufb (EDJ92095) in NTHi 3655.

eAlternative gene names for hpd, ldh, and hp6 are glpQ, lctD, and pal, respectively.