Table 1.
Protein Spot No. | Protein Description and Function | Gene | GenBank Accession Numbera | Molecular Weight (Da)b | pIb | Score | Sequence Coverage (%) |
---|---|---|---|---|---|---|---|
L1c | Elongation factor thermal unstable (EF-Tu) | tufA d | EDJ92442 | 43297.31 | 5.26 | 113 | 25 |
L2c | Protein D, glycerophosphoryl diester phosphodiesterase (PD) | hpd e | EDJ92229 | 41873.98 | 6.51 | 153 | 29 |
L3c | l-lactate dehydrogenase (LDH) | ldh e | EDJ92617 | 41873.32 | 6.55 | 221 | 36 |
L4 | Lipoprotein E, NADP phosphatase (P4) | hel | EDJ92235 | 30501.34 | 8.98 | 316 | 29 |
L5c | Peptidoglycan-associated outer membrane lipoprotein P6 (P6) | hp6 e | EDJ93375 | 16107.91 | 6.09 | 210 | 38 |
L6c | 30S ribosomal protein S6 (Rib30s) | rpaF | EDJ92478 | 14484.32 | 5.46 | 192 | 58 |
Abbreviations: LC-MS/MS, liquid chromatography-tandem mass spectrometry; NTHi, nontypeable Haemophilus influenzae; ORF, open reading frame.
aAccession number indicated is based upon the NTHi 3655 annotated genome database.
bMolecular weight and pI of each protein is predicted using Protparam tool (https://web.expasy.org/protparam/).
cFull-length ORFs were cloned into pET26(b)+ for expression of His-tagged recombinant proteins in Escherichia coli BL21 (DE3) followed by purification.
eAlternative gene names for hpd, ldh, and hp6 are glpQ, lctD, and pal, respectively.