Table 1.
DNA methylation-driven genes in ccRCC.
| Gene | Normal me | Tumor me | logFC | P value | Cor | Cor P value |
|---|---|---|---|---|---|---|
| C1orf116 | 0.647716 | 0.896463 | 0.468882 | 3.76E-109 | -0.6038 | 4.66E-54 |
| ALDOC | 0.315874 | 0.201405 | -0.64925 | 1.32E-72 | -0.44678 | 2.04E-27 |
| NCKAP1L | 0.822054 | 0.656117 | -0.32528 | 1.06E-64 | -0.35805 | 1.66E-17 |
| EVI2A | 0.854583 | 0.71327 | -0.26077 | 1.95E-62 | -0.5227 | 1.45E-38 |
| CD2 | 0.74397 | 0.633319 | -0.23231 | 1.57E-54 | -0.46794 | 3.01E-30 |
| BATF | 0.696094 | 0.535991 | -0.37707 | 3.59E-48 | -0.43104 | 1.96E-25 |
| CD96 | 0.703644 | 0.600698 | -0.22821 | 2.19E-45 | -0.35773 | 1.79E-17 |
| RAB25 | 0.498379 | 0.687697 | 0.46453 | 2.40E-38 | -0.38485 | 3.44E-20 |
| IL20RB | 0.886919 | 0.731896 | -0.27716 | 1.13E-33 | -0.50225 | 2.79E-35 |
| TMEM173 | 0.514377 | 0.327888 | -0.64963 | 4.07E-30 | -0.36018 | 1.04E-17 |
| CTSZ | 0.478134 | 0.400661 | -0.25503 | 7.68E-30 | -0.32922 | 6.89E-15 |
| MASP1 | 0.600411 | 0.503547 | -0.25382 | 8.74E-26 | -0.40218 | 4.61E-22 |
| LAMA4 | 0.426073 | 0.346439 | -0.2985 | 4.99E-22 | -0.36743 | 2.04E-18 |
| LTA | 0.859977 | 0.795969 | -0.11159 | 1.31E-18 | -0.56031 | 3.21E-45 |
| SLC9B2 | 0.43967 | 0.392664 | -0.16312 | 3.45E-13 | -0.38856 | 1.40E-20 |
| FAM107A | 0.465871 | 0.414634 | -0.16809 | 1.77E-11 | -0.32415 | 1.86E-14 |
| SLC5A12 | 0.705801 | 0.634831 | -0.15289 | 1.16E-08 | -0.33355 | 2.90E-15 |
| AL592211. | 0.44045 | 0.575433 | 0.38567 | 0.002048 | -0.32193 | 2.87E-14 |
| LRMP | 0.534103 | 0.516217 | -0.04914 | 0.039959 | -0.33687 | 1.48E-15 |