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. 2020 Jul 4;21(13):4765. doi: 10.3390/ijms21134765

Table 1.

FEP based absolute binding free energy calculations for p53-MDMX inhibitors.

S.no. PDBID/Ligand ΔGcalculated
(kcal/mol)
ΔGexperimental
(kcal/mol)
IC50 (µM) Ref.
1 3LBJ −6.56 ± 0.387 −6.76 11.0 [21]
2 WK23 −5.90 ± 0.341 −6.05 36.0 [21]
3 2N14 −5.95 ± 0.38 −7.3 ± 0.04 7.0 [35]
4 2N0U −10.48 ± 0.45 −8.6 ± 0.2 8.6 [35]
5 2N06 −7.20 ± 0.38 −6.7 ± 0.2 24.9 [35]

Mean absolute error: 0.816; root mean square error: 1.064; ΔG exp was calculated using IC50 values.