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. 2020 Jun 30;21(13):4683. doi: 10.3390/ijms21134683

Table 3.

Status of a set of chains forming a common "floor" within a superfibril expressed by means of a 3D Gaussian (3DG) distribution: a set of chains treated as an individual structural unit; 3D Gauss* (3DG*): determined for a set of chains treated as a superfibril component; 2D Gauss (2DG): a set of chains treated as an individual structural unit. RDe: RD values obtained after elimination of number of residues listed in the right column. The residues that are different for the set of eliminated residues are underlined.

Protein Chains RD
3DG
3DG *
2DG
RDe
3DG
3DG *
2DG
Number of Residues
Eliminated to Reach RD Value Below 0.5
Aβ(1–40) (2MVX) C, H 0.578
0.623
0.576
0.498
0.499
0.487
6
11
6
Aβ(15–40) (2MPZ)
N, O, P 0.630
0.584
0.644
0.498
0.497
0.481
3
5
4
Aβ(11–42)S (5KK3)
E, N 0.607
0.536
0.609
0.489
0.495
0.494
4
4
4
TAU (5O3L)
E, F 0.666
0.637
0.655
0.485
0.497
0.495
28
18
22