Table 7.
List of amyloids analyzed in the present work. The composition of superfibrils, if applicable, and the number of protofibrils in superfibrils, if applicable, (number in parentheses) are given. The number of "floors" (layers) in the super- and protofibril construction is also given. 2MPZ* denotes Aβ(15–40)51 D23N, a 51-layer protofibril generated in silico according to the 2MPZ protofibril scheme.
| PDB ID | Name | Structure | Number of layers | Ref |
|---|---|---|---|---|
| 2MXU | Aβ(11–42) | Protofibril | 12 | [20] |
| 2MVX | Aβ(1–40) E22Δ | Superfibril (2) | 5 | [21] |
| 2MPZ | Aβ(15–40)D23N | Superfibril (3) | 9 | [22] |
| 5KK3 | Aβ(11–42)S | Superfibril (2) | 9 | [23] |
| 5O3L | TAU | Superfibril (2) | 5 | [24] |
| 2N0A | ASyn | Protofibril | 10 | [25] |
| 30–100 | 30–100 | 10 | ||
| 47–100 | 47–100 | 10 | ||
| 6HUD | IgG V domain ImVA | Protofibril | 5 | |
| 2MPZ* | Aβ(15–40)51 D23N* | Protofibril | 51 | [26] |