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. 2020 Jun 19;1(1):e19371. doi: 10.2196/19371

Figure 5.

Figure 5

Molecular dynamics simulations of the CTL and HTL MEVs with TLR3. (A), (C): Root mean square deviations for the Cα, backbone, and all atoms for the CTL MEV-TLR3 complex and the HTL MEV-TLR3 complex. (B), (D): Root mean square fluctuations of all the amino acid residues of the CTL MEV and the HTL MEV in complex with the TLR3 immune receptor. Å: angstroms. COVID-19: coronavirus disease. CTL: cytotoxic T lymphocyte. HTL: helper T lymphocyte. MEV: multiepitope vaccine. TL3: toll-like receptor 3. RMSD: root mean square deviation. RMSD Ca: root mean square deviation for the alpha carbon atoms. RMSD Bb: root mean square deviation for the backbone atoms. RMSD All: root mean square deviation for all atoms. RMSF: root mean square fluctuation.