Table 3.
Comparison by sequence of prophage genomes and bacterial genomes
|
Prophage size (bp)* |
Prophage |
Bacterial strain |
MPV international cluster‡ |
||
|---|---|---|---|---|---|
|
Name |
Genome accession no.† |
Name |
Genome accession no.† |
||
|
33 226 |
ST11-OXA245phi3.1 |
ST11-OXA245 |
4762 |
||
|
ST437-OXA245phi4.2 |
ST437-OXA245 |
||||
|
ST11-VIM1phi8.4 |
ST11-VIM1 |
||||
|
ST340-VIM1phi10.2 |
ST340-VIM1 |
||||
|
ST512-KPC3phi13.2 |
ST512-KPC3 |
||||
|
ST11-OXA48phi15.3 |
ST11-OXA48 |
||||
|
ST258-KPC3phi16.2 |
ST258-KPC3 |
||||
|
36 124 |
ST340-VIM1phi10.1 |
ST340-VIM1 |
4901 |
||
|
ST11-OXA48phi15.1 |
ST11-OXA48 |
||||
|
39 643 |
ST437-OXA48phi4.1 |
ST437-OXA48 |
3499 |
||
|
ST512-KPC3phi13.6 |
ST512-KPC3 |
||||
|
ST258-KPC3phi16.1 |
MK4333581.1 |
ST258-KPC3 |
|||
|
42 666 |
ST11-VIM1phi8.1 |
ST11-VIM1 |
4280 |
||
|
ST512-KPC3phi13.1 |
ST512-KPC3 |
||||
*Prophage genomes located in the genomes of different K. pneumoniae clinical strains have been placed into four size groups (33.3, 36.1, 39.6 and 42.6 kb).
†Accession numbers of genomes from BioProject accession no. PRJNA565865.
‡MVP international clusters 4762, 4901, 3499 and 4280 from the MVP database (https://mvp.medgenius.info).