Table 5. Semi-automatic complete annotation of the IS found within L. reuteri PNW1 genome using the ISfinder search tool.
IS Name | IS Family | IS Origin | Length (bp) | ORF Function |
---|---|---|---|---|
ISLre2 | ISLre2 | Lactobacillus reuteri | 1570 bp | Transposase |
ISLac1 | IS1182 | Lactobacillus acidophilus | 1833 bp | Transposase |
ISCco2 | IS1595 | Campylobacter coli | 7852 bp | 1. Transposase |
2. Passenger Gene (Streptothricin Adenyltransferase, Streptothricin acetyltransferase) | ||||
ISSag10 | IS1595 | Streptococcus agalactiae | 1724 bp | 1. Transposase |
2. Passenger Gene (O-lincosamide nucleotidyltransferase) | ||||
IS2001 | ISL3 | Bifidobacterium lactis | 1406 bp | Transposase |
Key: ORF = open reading frame