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. 2020 Jun 26;7(7):ofaa251. doi: 10.1093/ofid/ofaa251

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© The Author(s) 2020. Published by Oxford University Press on behalf of Infectious Diseases Society of America.

This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs licence (http://creativecommons.org/licenses/by-nc-nd/4.0/), which permits non-commercial reproduction and distribution of the work, in any medium, provided the original work is not altered or transformed in any way, and that the work is properly cited. For commercial re-use, please contact journals.permissions@oup.com

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Figure 2. — Overview of differences in alpha and beta diversity among patients with nontyphoidal febrile illness (n = 46), typhoid fever (n = 14), and controls (n = 36). The Shannon index and the Observed Taxa (OT) index were used to calculate the diversity community (A) and richness (B) within each individual microbiota sample. Data are presented as a dot plot with a line at the median. Principal coordinates analysis of unweighted (C) and weighted (D) UniFrac distances of samples of patients with typhoid fever, nontyphoidal febrile illness, or healthy controls. *P < .05; ^**P < .01; ^***P < .001.