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. 2020 Jul 21;10:12043. doi: 10.1038/s41598-020-68654-3

Table 5.

Whole genome nucleotide alignment of eight blueberry red ringspot virus sequences from Florida and other regions by MUSCLE showing percent nucleotide identity between each sequence.

BRRV sequences NJ SL CZ PL e12 e10 e9 e14 e11 e13 e15 e16
NJ 93.27 93.73 94.55 93.78 93.73 93.78 93.78 93.82 93.82 93.82 93.78
SL 93.27 94.65 94.95 94.43 94.44 94.44 94.44 94.52 94.52 94.50 94.45
CZ 93.73 94.65 96.00 96.34 96.32 96.35 96.35 96.41 96.41 96.37 96.35
PL 94.55 94.95 96.00 96.55 96.52 96.56 96.56 96.63 96.63 96.59 96.58
e12 93.78 94.43 96.34 96.55 99.77 99.78 99.81 99.88 99.88 99.84 99.82
e10 93.73 94.44 96.32 96.52 99.77 99.78 99.92 99.87 99.87 99.90 99.89
e9 93.78 94.44 96.35 96.56 99.78 99.78 99.82 99.88 99.88 99.84 99.82
e14 93.78 94.44 96.35 96.56 99.81 99.92 99.82 99.91 99.91 99.95 99.93
e11 93.82 94.52 96.41 96.63 99.88 99.87 99.88 99.91 100.00 99.94 99.92
e13 93.82 94.52 96.41 96.63 99.88 99.87 99.88 99.91 100.00 99.94 99.92
e15 93.82 94.50 96.37 96.59 99.84 99.90 99.84 99.95 99.94 99.94 99.95
e16 93.78 94.45 96.35 96.58 99.82 99.89 99.82 99.93 99.92 99.92 99.95

CZ Czech Republic, FL Florida, NJ New Jersey, PL Polish, SL Slovenia.