Table 1.
Novel alleles observed in 107 Tibetan samples.
| Locus | LB Allele | Allele name (using nomenclature according to Parson et al. 2016) | Count |
|---|---|---|---|
| FGA | 26 | FGA [CE26]-Chr4-GRCh38 154,587,736–154,587,823 [GGAA]2 GGAG [AAAG]16 AGAG AAAG AGAA AAAA [GAAA]3 | 1 |
| FGA | 27 | FGA [CE27]-Chr4-GRCh38 154,587,736–154,587,823 [GGAA]2 GGAG [AAAG]17 AGAG AAAG AGAA AAAA [GAAA]3 | 1 |
| FGA | 29 | FGA [CE29]-Chr4-GRCh38 154,587,736–154,587,823 [GGAA]2 GGAG [AAAG]19 AGAG AAAG AGAA AAAA [GAAA]3 | 1 |
| D6S1043 | 16 | D6S1043 [CE16]-Chr6-GRCh38 91,740,225–91,740,272 [ATCT]16 | 1 |
| D6S1043 | 19.3 | D6S1043 [CE19.3]-Chr6-GRCh38 91,740,225–91,740,272 [ATCT]5 ATGT [ATCT]2 ATC [ATCT]11 91,740,273-A | 1 |
| D7S820 | 10.1 | D7S820 [CE10.1]-Chr7-GRCh38 84,160,226–84,160,277 [TATC]10 84,160,204-A; 84,160,204.1A | 1 |
| D7S820 | 11 | D7S820 [CE11]-Chr7-GRCh38 84,160,226–84,160,277 [TATC]9 TGTC TATC 84,160,204-A | 1 |
| D8S1179 | 8 | D8S1179 [CE8]-Chr8-GRCh38 124,894,865–124,894,916 [TCTA]7 TCAA | 1 |
| vWA | 16 | vWA [CE16]-Chr12-GRCh38 5,983,977–5,984,044 [TAGA]10 [CAGA]5 TAGA | 4 |
| vWA | 17 | vWA [CE17]-Chr12-GRCh38 5,983,977–5,984,044 [TAGA]12 [CAGA]4 CAGA | 1 |
| D12S391 | 25 | D12S391 [CE25]-Chr12-GRCh38 12,297,020–12,297,095 [AGAT]16 [AGAC]3 AGAA [AGAC]4 AGAT | 2 |
| D16S539 | 8 | D16S539 [CE8]-Chr16-GRCh38 86,352,702–86,352,745 [GATA]8 86,352,692-G | 3 |
| D16S539 | 8 | D16S539 [CE8]-Chr16-GRCh38 86,352,702–86,352,745 [GATA]8 86,352,761-C | 1 |
| D19S433 | 12.2 | D19S433 [CE12.2]-Chr19-GRCh38 29,926,235–29,926,298 [CCTT]11 cctt CCTT tt CCTT | 1 |
| D21S11 | 28 | D21S11 [CE28]-Chr21-GRCh38 19,181,973–19,182,099 [TCTA]5 [TCTG]5 [TCTA]3 ta [TCTA]2 tca [TCTA]2 tccata [TCTA]11 | 2 |
| D21S11 | 29 | D21S11 [CE29]-Chr21-GRCh38 19,181,973–19,182,099 [TCTA]7 [TCTG]4 [TCTA]3 ta [TCTA]3 tca [TCTA]2 tccata [TCTA]10 | 1 |
| D21S11 | 29 | D21S11 [CE29]-Chr21-GRCh38 19,181,973–19,182,099 [TCTA]6 [TCTG]5 [TCTA]3 ta [TCTA]3 tca [TCTA]2 tccata [TCTA]10 19,182,101-T | 2 |
| D21S11 | 32.2 | D21S11 [CE32.2]-Chr21-GRCh38 19,181,973–19,182,099 [TCTA]5 [TCTG]7 [TCTA]3 ta [TCTA]3 tca [TCTA]2 tccata [TCTA]11 TA TCTA | 1 |
| D21S11 | 33.2 | D21S11 [CE33.2]-Chr21-GRCh38 19,181,973–19,182,099 [TCTA]5 [TCTG]6 [TCTA]3 ta [TCTA]4 tca [TCTA]2 tccata [TCTA]12 TA TCTA | 2 |
| DYS481 | 29 | DYS481 [CE29]-ChrY-GRCh38 8,558,337–8,558,402 [CTT]29 8,558,336-T | 1 |
| DYS612 | 36 | DYS612 [CE36]-ChrY-GRCh38 13,640,728–13,640,835 [CCT]5 CTT [TCT]4 CCT [TCT]25 13,640,861-C | 1 |
| DYS390 | 23 | DYS390 [CE23]-ChrY-GRCh38 15,163,067–15,163,162 [TAGA]4 CAGA [TAGA]9 [CAGA]9 15,163,163-C | 1 |
| DYS390 | 26 | DYS390 [CE26]-ChrY-GRCh38 15,163,067–15,163,162 [TAGA]4 CAGA [TAGA]12 [CAGA]9 | 2 |
| DYS390 | 27 | DYS390 [CE27]-ChrY-GRCh38 15,163,067–15,163,162 [TAGA]4 CAGA [TAGA]13 [CAGA]9 | 1 |
| DYS390 | 27 | DYS390 [CE27]-ChrY-GRCh38 15,163,067–15,163,162 [TAGA]4 CAGA [TAGA]12 [CAGA]10 | 3 |
| Y-GATA-H4 | 10 | Y-GATA-H4 [CE10]-ChrY-GRCh38 16,631,673–16,631,720 [TCTA]10 16,631,756-G | 7 |
| Y-GATA-H4 | 11 | Y-GATA-H4 [CE11]-ChrY-GRCh38 16,631,673–16,631,720 [TCTA]11 16,631,756-G | 15 |
| Y-GATA-H4 | 12 | Y-GATA-H4 [CE12]-ChrY-GRCh38 16,631,673–16,631,720 [TCTA]12 16,631,756-G | 1 |
| DYS460 | 9 | DYS460 [CE9]-ChrY-GRCh38 18,888,956–18,888,995 [CTAT]9 18,888,914-T; 18,888,949-T | 1 |
| DYS448 | 17 | DYS448 [CE17]-ChrY-GRCh38 22,218,923–22,219,078 [AGAGAT]10 N42 [AGAGAT]7 | 4 |
| DYS448 | 17 | DYS448 [CE17]-ChrY-GRCh38 22,218,923–22,219,078 [AGAGAT]9 N42 [AGAGAT]8 | 1 |
| DYS448 | 18 | DYS448 [CE18]-ChrY-GRCh38 22,218,923–22,219,078 [AGAGAT]11 N36 [AGAGAT]8 22,218,995–22,219,000 DEL | 1 |
| DYF387S1 | 39 | DYF387S1 [CE39]-ChrY-GRCh38 25,884,581–25,884,724 [CTTT]18 [CTTC]8 [CTTT]2 CTTC [CTTT]2 [CTTC]4 CTAC [CTTT]3 | 2 |
| DXS8378 | 10 | DXS8378 [CE10]-ChrX-GRCh38 9,402,262–9,402,301 [ATAG]10 9,402,257-G | 1 |
| DXS8378 | 10 | DXS8378 [CE10]-ChrX-GRCh38 9,402,262–9,402,301 [ATAG]5 ACAG [ATAG]4 | 1 |
| DXS7132 | 10 | DXS7132 [CE10]-ChrX-GRCh38 65,435,647–65,435,702 [TAGA]10 | 1 |
| DXS10074 | 15.3 | DXS10074 [CE15.3]-ChrX-GRCh38 67,757,345–67,757,400 [AAGA]10 AAA [AAGA]2 AAGG [AAGA]2 | 4 |
| DXS10074 | 16.3 | DXS10074 [CE16.3]-ChrX-GRCh38 67,757,345–67,757,400 [AAGA]11 AAA [AAGA]2 AAGG [AAGA]2 | 2 |
| DXS10103 | 21 | DXS10103 [CE21]-ChrX-GRCh38 134,284,959–134,285,038 [TAGA]2 ctga CAGA [TAGA]13 [CAGA]4 TAGA | 4 |