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. 2020 Jul 22;3(7):e207750. doi: 10.1001/jamanetworkopen.2020.7750

Table 3. Performance Measures of Organism-Specific ICD-9 Pneumonia Diagnosis Codes for Identifying Organism-Positive Laboratory Findings.

Organism ICD-9 code ICD-9 performance vs laboratory criterion standard, %a
Test performance Predictive value
Sensitivity Specificity Positive Negative
MSSA 482.41 14.2 99.9 91.1 95.4
MRSA 482.42 49.3 99.4 76.0 98.1
Streptococcus pneumoniae 481, 482.30 60.1 99.2 73.4 98.5
Pseudomonas spp 482.1 46.9 99.7 80.3 98.5
Escherichia coli 482.82 17.3 100 88.7 98.4
Klebsiella pneumoniae 482 35.7 99.9 79.1 99.1
Haemophilus influenzae 482.2 42.8 99.9 84.7 99.4
Mycoplasma pneumoniae 483 53.5 99.8 61.8 99.7
Legionella spp 482.84 78.4 99.9 82.5 99.9
Influenza virus 487.x, 488.x 95.9 98.9 70.8 99.9
Respiratory syncytial virus 480.1 24.1 100 67.2 99.9
Parainfluenza virus 480.2 14.0 100 57.1 99.9

Abbreviations: ICD-9, International Classification of Diseases, Ninth Revision; MRSA, methicillin-resistant Staphylococcus aureus; MSSA, methicillin-sensitive Staphylococcus aureus; spp several species.

a

Microbiological data (test results for blood or respiratory culture, urinary antigen, or polymerase chain reaction) are considered as the criterion standard.