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. 2020 Jul 23;6(7):e04502. doi: 10.1016/j.heliyon.2020.e04502

Table 1.

2D structures of top 10 drugs along with their interacting residues, ligand efficiency, docking scores Glide/SP and Glide/IFD (kcal/mol) and existing usage of the drugs.

FDA Approved Drugs 2D Structures Docking Score Kcal/mol IFD kcal/mol Glide Ligand Efficiency (SP) Interacting Residues (SP) Treatment
(Existing usage)
Ornipressin Image 1 -10.376 -10.15 -0.144 ASP760, THR591, ASP865, GLN815, SER814, CYS813, GLU811, TYR619 Vasoconstrictor,
Renal failure during decompensated liver cirrhosis [23, 24]
Atosiban Image 2 -10.096 -11.11 -0.148 ASP760, GLU811, SER814, TYR619, ASP833 Inhibitor of oxytocin and vasopressin [25]
Lanreotide Image 3 -10.059 -9.81 -0.131 ASP761, ASP760, ASN691, SER682 Analogue of Somatostatin involved in suppressing growth hormones, glucagon, and insulin [26]
Argiprestocin Image 4 -9.874 -11.68 -0.137 ASP761, TRP617 SER814, CYS813, GLU811 Septic shock [27]
Demoxytocin Image 5 -9.689 -8.75 -0.142 TRP617, TYR619, LYS621, SER682, ASP760, ASP761, GLU811 Oxytocin analogue [28]
Carbetocin Image 6 -9.479 -9.61 -0.137 ALA550, ARG553, THR556, ASP623, ASP760, TYR619, TRP617, TRP800 Synthetic analogue Oxytocin, postpartum hemorrhage [29]
Lypressin Image 7 -9.413 -9.61 -0.129 ARG624, VAL557, ARG555, ARG553, ASP760, ASP761, ALA762, GLU811, TRP617, TYR619 Vasopressins
(Lysine vasopressin), diabetes insipidus, anti-diuretic [30]
Examorelin Image 8 -9.308 -10.45 -0.143 GLU811, ASP760, SER814, GLN815, ARG555 Synthetic peptide increases the plasma level of growth hormones [31, 32]
Colistin Image 9 -9.241 No pose -0.113 ASN691, ASP684, SER682, ASP760, TRP617, ASP618, TYR619, LYS551 Lung infection [33], Cystic fibrosis [34, 35, 36], Ventilator-associated pneumonia [37], nosocomial pneumonia [38], antibiotic against multidrug-resistant gram-negative bacterial infections [39]
Polymyxin B1 Image 10 -9.228 -11.92 -0.109 ARG555, ASN691, ASP618, ASP761, ASP760, CYS813 Antibiotic used against multidrug-resistant gram-negative bacterial infection [39, 40]