Table 3.
Co-expression of TP53 mRNA in the cBioPotral data sets of glioblastoma.
| Correlated gene | Spearman's correlation | p-value | q-value | TP53 correlation | Microarray results |
|---|---|---|---|---|---|
| KCNJ12 | 0.115 | 0.159 | 0.207 | WT/Up | |
| SLC22A18AS | 0.188 | 0.0204 | 0.0316 | ||
| HPGD | 0.157 | 0.0532 | 0.0764 | WT/Down | |
| BCAS1 | − 0.0665 | 0.416 | 0.481 | ||
| PADI1 | 0.152 | 0.0622 | 0.0882 | ||
| HIST1H1E | 0.0621 | 0.447 | 0.513 | ||
| KRT13 | 0.224 | 5.50E–03 | 9.25E–03 | ||
| IL8 | There are no results | ||||
| XDH | 0.0721 | 0.377 | 0.444 | WT/Contra | |
| SULT6B1 | 0.105 | 0.196 | 0.25 | ||
| ANGPTL4 | 0.0157 | 0.848 | 0.877 | ||
| NFKBIA | 0.31 | 1.02E–04 | 2.19E–04 | ||
| HMOX1 | 0.15 | 0.0652 | 0.092 | ||
| SPRR1B | – 0.0589 | 0.471 | 0.537 | ||
| ZFP36 | 0.188 | 0.0206 | 0.0318 | ||
| CDKN1C | 0.0919 | 0.26 | 0.321 | ||
| ND6 | There are no results | ||||
| WFDC21P | There are no results | ||||
| DDIT4 | 0.126 | 0.122 | 0.162 | MT/Up | |
| HSPA1A | 0.26 | 1.21E–03 | 2.24E–03 | ||
| HSPA6 | 0.161 | 0.0469 | 0.068 | ||
| JDP2 | 0.28 | 4.86E–04 | 9.47E–04 | ||
| CTH | 0.356 | 6.75E–06 | 1.70E–05 | ||
| MKNK2 | 0.529 | 2.33E–12 | 1.71E–11 | Positive | |
| MMP3 | – 0.0763 | 0.35 | 0.416 | ||
| GDF15 | 0.236 | 3.41E–03 | 5.91E–03 | ||
| MMP1 | – 0.0358 | 0.662 | 0.717 | ||
| NDRG1 | 0.0555 | 0.497 | 0.563 | ||
| KCNG1 | 0.0973 | 0.233 | 0.29 | ||
| TRIB3 | 0.178 | 0.0286 | 0.043 | ||
| CLU | 0.106 | 0.192 | 0.245 | ||
| ANGPT1 | 0.255 | 1.52E–03 | 2.77E–03 | ||
| AKR1C1 | – 0.112 | 0.168 | 0.218 | ||
| ECM2 | 0.244 | 2.48E–03 | 4.39E–03 | ||
| FLCN | 0.494 | 9.79E–11 | 5.30E–10 | Positive | |
| SEL1L3 | 0.31 | 9.94E–05 | 2.13E–04 | ||
| FBXO2 | – 0.0616 | 0.451 | 0.517 | ||
| RAB3IL1 | 0.251 | 1.82E–03 | 3.28E–03 | ||
| OSGIN1 | 0.0814 | 0.319 | 0.384 | ||
| CRYAB | – 0.101 | 0.216 | 0.272 | ||
| NUPR1 | – 0.00709 | 0.931 | 0.945 | ||
| DNAJB4 | 0.347 | 1.19E–05 | 2.89E–05 | Positive | |
| PAX8-AS1 | 0.0112 | 0.891 | 0.913 | ||
| KCNE4 | 0.204 | 0.0115 | 0.0186 | ||
| LINC-PINT | 0.116 | 0.154 | 0.201 | ||
| SP140 | 0.112 | 0.169 | 0.218 | ||
| DDIT4L | 0.151 | 0.0637 | 0.0902 | ||
| CHAC1 | 0.178 | 0.0282 | 0.0425 | ||
| SLC6A9 | 0.315 | 7.57E-05 | 1.65E-04 | ||
| HSPA1B | 0.268 | 8.57E-04 | 1.62E-03 | ||
| lnc-EIF2D-1 | There are no results | ||||
| LOC389602 | There are no results | ||||
| NOV | There are no results | ||||
| ST6GALNAC2 | 9.49E–03 | 0.908 | 0.926 | MT/Down | |
| DHRS3 | 0.058 | 0.478 | 0.544 | ||
| CCNE2 | 0.406 | 2.12E–07 | 6.62E–07 | ||
| RAC3 | 0.278 | 5.33E–04 | 1.03E–03 | ||
| RBM3 | 0.39 | 6.69E–07 | 1.94E–06 | Positive | |
| ENHO | 0.0251 | 0.759 | 0.802 | ||
| KBTBD11 | 0.311 | 9.46E–05 | 2.04E–04 | MT/Contra | |
| EXOC3L4 | 0.0941 | 0.249 | 0.308 | ||
Whole-exome and/or whole-genome sequencing of 257 of the 543 glioblastoma tumor/normal pairs. The Cancer Genome Atlas (TCGA) Glioblastoma Project36.