Table 1. Comparison of Native MS Data on Ternary Complex Formation with Literature Values.
KD of VCB binding to [PROTAC + substrate] |
cooperativity | t1/2 of ternary complex | fraction of ternary complex | |||
---|---|---|---|---|---|---|
PROTAC | substrate | ITC18 | SPR16 | SPR16 | SPR16 | nMS |
AT1 | Brd4BD1 | 390 nM | 578 nM | 0.2 | <1 s | 0.65 ± 0.1 |
AT1 | Brd3BD2 | 79 nM | 163 nM | 0.7 | 3 s | 0.58 ± 0.07 |
AT1 | Brd4BD2 | 46 nM | 24 nM | 4.7 | 26 s | 0.82 ± 0.06 |
MZ1 | Brd4BD1 | 28 nM | 30 nM | 0.9 | <1 s | 0.80 ± 0.06 |
MZ1 | Brd3BD2 | 7 nM | 8 nM | 3.6 | 6 s | 0.83 ± 0.05 |
MZ1 | Brd4BD2 | 4 nM | 1 nM | 22 | 130 s | 0.92 ± 0.03 |