Table 2.

Time benchmarking of DADA2, deblur, source CH-HIT-OUT-Miseq utilities and CDSnake on three mock community datasets and set of these datasets (All row)

	Time, sec
	DADA2	deblur	source CD-HIT	CDSnake
HMP	4614.8	1371.72	2149.59	2263.83
Balanced	8207.96	2558.82	9345.62	9563.57
Extreme	7362.38	3599.73	47,684.8	43,170.37
All	17,509.9	6376.05	39,775.51	39,891.53