Figure 3.
Relationships of tetraploid S. caesia in clade Ia. (A) SNAPP species tree. (B) RAxML phylogeny based on 38,603 RAD loci and 238,614 SNPs, respectively. Bootstrap support values below, QS values above branches. (C) Resulting Splitsgraph of the NeighbourNet analysis of subclade Ia. Bootstrap values indicated at branches. (D) Genetic structure analysis for the subclade for the most likely value of K=4 based on 37,867 unlinked SNPs.