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. 2018 Nov 9;97(2):281–295. doi: 10.1111/tpj.14115

Table 3.

The repertoire of RFL proteins in Hordeum vulgare cv. ‘Morex’ Refseqv1.0 genome

# RFL ID Gene name Genomic location Cluster/sensing Physical position [start–end] (orientation) Gene length (bp) PPR motif structure mTP yes [length amino acids) Possible pseudogene
1. HvRFL01 HORVU1Hr1G004750 chr1H Sub‐cluster 1 [9851312–9848892] (REVERSE) 2421 56‐P‐46‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐38 Yes [111]
2. HvRFL02 Not annotated chr1H [9907009–9904493] (REVERSE) 2517 56‐P‐46‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐315 Yes [25] Yes
3. HvRFL03 HORVU1Hr1G010890 chr1H Sub‐cluster 2 [25542037–25539329] (REVERSE) 2709 199‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐70 Yes [18]
4. HvRFL04 HORVU1Hr1G010970 chr1H [25974315–25976849] (FORWARD) 2535 58‐P‐48‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐70 Yes [21]
5. HvRFL05 HORVU1Hr1G011020 chr1H [26214086–26211741] (REVERSE) 2346 149‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐70 Yes [53]
6. HvRFL06 Not annotated chr1H [26421244–26418548] (REVERSE) 2697 195‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐35 Yes [77]
7. HvRFL07 Not annotated chr1H [26485385–26488081] (FORWARD) 2697 195‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐35 Yes [77]
8. HvRFL08 HORVU1Hr1G011160 chr1H [26659630–26662332] (FORWARD) 2703 197‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐70 Yes [18]
9. HvRFL09 HORVU1Hr1G011300 chr1H [27069847–27072621] (FORWARD) 2775 221‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐70 Yes [18]
10. HvRFL10 HORVU1Hr1G011400 chr1H [27458351–27456489] (REVERSE) 1863 68‐P‐48‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐35‐P‐8 Yes [107]
11. HvRFL11 HORVU1Hr1G013810 chr1H Sub‐cluster 3 [37317192–37319720] (FORWARD) 2529 140‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐70 Yes [32]
12. HvRFL12 HORVU1Hr1G014030 chr1H [38711706–38709145] (REVERSE) 2562 150‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐70 Yes [19]
13. HvRFL13 HORVU1Hr1G014040 chr1H [38766653–38769199] (FORWARD) 2547 145‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐35‐P Yes [46]
14. HvRFL14 HORVU1Hr1G014060 chr1H [38811031–38813742] (FORWARD) 2712 198‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐70 Yes [33]
15. HvRFL15 Not annotated chr1H Singlet [48954576–48956174] (FORWARD) 1599 5‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐37 No Yes
16. HvRFL16 HORVU2Hr1G105460 chr2H Cluster 1 [706791942–706790239] (REVERSE) 1704 44‐P‐P‐P‐P‐P‐P‐P‐53‐P‐P‐P‐P‐P‐50 No Yes
17. HvRFL17 HORVU2Hr1G116650 chr2H [738768328–738766658] (REVERSE) 1671 P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐86 No Yes
18. HvRFL18 HORVU6Hr1G002890 chr6H Singlet [7033847–7031583] (REVERSE) 2265 124‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐31‐P‐P‐P‐P‐36 Yes [25]
19. HvRFL19 HORVU6Hr1G014310 chr6H Singlet [30413113–30415251] (FORWARD) 2139 103‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐11 Yes [46] Yes
20. HvRFL20 HORVU6Hr1G014310 chr6H Singlet [43353403–43354881] (FORWARD) 1479 101‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐6 No Yes
21. HvRFL21 HORVU6Hr1G076780 chr6H Singlet [527185061–527182566] (REVERSE) 2496 128‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐35 Yes [10]
22. HvRFL22 HORVU7Hr1G029840 chr7H Singlet [56755710–56753593] (REVERSE) 2118 36‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐38 No Yes
23. HvRFL23 Not annotated Unknowna Unknown [177465399–177467981] (FORWARD) 2583 157‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐70 Yes [35]
24. HvRFL24 HORVU0Hr1G031920 Unknowna Unknown [190422976–190420268] (REVERSE) 2709 199‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐70 Yes [18]
25. HvRFL25 Not annotated Unknowna Unknown [210337547–210339712] (FORWARD) 2166 126‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P No Yes
26. HvRFL26 HORVU0Hr1G035310 Unknowna Unknown [210357231–210359657] (FORWARD) 2427 105‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐P‐70 Yes [35]

Genes most likely located in RFL sub‐cluster 2 on chromosome 1H (based on CD‐HIT clustering).

mTP, mitochondrial targeting sequence; PPR, pentatricopeptide repeat; RFL, restorer‐of‐fertility‐like.