Skip to main content
. 2020 Jul 21;8:e9502. doi: 10.7717/peerj.9502

Table 2. Allelic profiles of antibiotic resistant genesa and antibiotic susceptibility of the Vietnamese isolatesb.

Locus Antibiotic susceptibility
gyrA penA rpoB NEIS0123 NEIS0414 NEIS1320 NEIS1525 NEIS1600 NEIS1609 NEIS1635 NEIS1753 AM CIP CTX CRO RI MRP CL
NMB_VN2013 2 587 42 1446 1 32 1338 1315 NA* 7 NA* I S S S S S R
0.42 0.004 0.016 0.002 0.25 0.064 62
NMB_VN2014 2 587 42 1446 1 32 1338 NA NA* 1086 NA* I S S S I S R
0.5 0.008 0.016 0.004 1.5 0.094 256
NMB_VN2015 2 587 42 1446 1 32 1338 1315 NA* 7 2242 I S S S S S R
0.62 0.008 0.023 0.002 0.125 0.064 64

Notes.

a

An allele number was assigned to each locus based on its DNA sequence using PubMLST database (https://pubmlst.org/) (Jolley & Maiden, 2010).

b

Antibiotic susceptibility of isolates was examined using E-test strip (bioMerieux, France) and interpreted according to CLSI 2018 breakpoints (CLSI, 2018).

NA*
new, unassigned alleles identical at said locus
I
Intermediate
S
Susceptible
R
Resistance

Numbers below each susceptibility interpretation indicate MIC (µg/ml) values.