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. 2020 Jul 24;15(7):e0235030. doi: 10.1371/journal.pone.0235030

Fig 6. RMSD analysis of MD simulation trajectory.

Fig 6

The RMSD plot obtained for (a) compound 2-SARS-CoV-2 main protease complex (PDB ID 6LU7), and (b) compound 3-SARS-CoV-2 main protease complex (PDB ID 6Y2F). The simulation time of 20 ns showing the formation of stable complex without any significant conformational changes in protein structure.