Table 2.
Gene | Polarity | Sequence (5′ → 3′) | Size (bp) | Amplification efficiency (%) | NCBI accession no. |
---|---|---|---|---|---|
Cytokine | |||||
IL-1β | Forward | ATTCTCTCCAGCCAACCTTCATT | 100 | 96 | NM_174093 |
Reverse | TTCTCGTCACTGTAGTAAGCCATCA | ||||
IL-6 | Forward | ATGACTTCTGCTTTCCCTACCC | 180 | 105 | NM_173923 |
Reverse | GCTGCTTTCACACTCATCATTC | ||||
IL-8 | Forward | GACAGCAGAGCTCACAAGCATCT | 105 | 94 | NM_173925.2 |
Reverse | AAGCTGCCAAGAGAGCAACAG | ||||
IL-10 | Forward | ACAGGCTGAGAACCACGGGC | 175 | 90 | NM_174088.1 |
Reverse | GACACCCCTCTCTTGGAGCTCACT | ||||
TNF-α | Forward | CCAGAGGGAAGAGCAGTCCC | 114 | 92 | NM_173966.3 |
Reverse | TCGGCTACAACGTGGGCTAC | ||||
Chemokine | |||||
CXCL-1 | Forward | CATCCAGAGCGTGAAGGTGA | 100 | 97 | NM_175700.2 |
Reverse | GGTGGGGTTGAGACACACTT | ||||
CXCL-6 | Forward | TGAGAGAGCTGCGTTGTGTG | 119 | 103 | NM_174300.2 |
Reverse | GGTGGCTATCACTTCCACCT | ||||
MCP-1 | Forward | GCAATTAACTCCCAAGTCGCC | 161 | 95 | NM_174006.2 |
Reverse | TGCTTGGGGTCTGCACATAA | ||||
MCP-2 | Forward | ATCACCAACAGCCAGTGTCC | 133 | 91 | NM_174007.1 |
Reverse | TCGGTGTTCGGGACTTTTGG | ||||
Adhesion molecule | |||||
ICAM-1 | Forward | CGACCACAGGAGCAACTTCT | 171 | 106 | NM_174348.2 |
Reverse | TCGCACTTCAGGGTCTGTTC | ||||
E-selectin | Forward | CATCCTCAGAACGGCACTGT | 167 | 97 | NM_174181.2 |
Reverse | ACTTCACAAACTGGGACCCG | ||||
Inflammatory molecule | |||||
COX-2 | Forward | ATCTACCCGCCTCATGTTCCT | 187 | 93 | AF031698 |
Reverse | GGATTAGCCTGCTTGTCTGGA | ||||
iNOS | Forward | CAGGATGACCCCAAACGTCA | 190 | 101 | XM_024979646.1 |
Reverse | CCTTCTGGTGAAGCGTGTCT | ||||
PAI-1 | Forward | TCTTCCACAAGTCCGATGGC | 142 | 92 | XM_024984644.1 |
Reverse | ATGCTGAGAGTGTTCCCGTG | ||||
Housekeeping gene | |||||
ACTB | Forward | ACTTGCGCAGAAAACGAGAT | 123 | 97 | BT030480 |
Reverse | CACCTTCACCGTTCCAGTTT | ||||
GAPDH | Forward | GGGTCATCATCTCTGCACCT | 176 | 95 | DQ402990 |
Reverse | GGTCATAAGTCCCTCCACGA | ||||
UXT | Forward | TGTGGCCCTTGGATATGGTT | 101 | 101 | BC108205.1 |
Reverse | GGTTGTCGCTGAGCTCTGTG |