Table 1.
Sample ID | Diagnosis | Smoker | Disease duration | MTX, mg/w | cDMARD | Biologics | Prednisolone, mg/d |
---|---|---|---|---|---|---|---|
1 | RA | No | 5 | 10 | MTX | TNFi | NA |
RA | No | 8 | 25 | MTX | TNFi | NA | |
RA | No | 9 | 0 | SLZ | TNFi | NA | |
2 | RA | Yes | 23 | 15 | MTX | CTLA4 | NA |
RA | Yes | 5 | 10 | MTX | TNFi | NA | |
3 | HC | Yes | NA | 0 | No | No | NA |
HC | Yes | NA | 0 | No | No | NA | |
4 | HC | No | NA | 0 | No | No | NA |
HC | No | NA | 0 | No | No | NA | |
5 | RA | Yes | 31 | 25 | MTX | CTLA4 | NA |
6 | HC | No | NA | 0 | No | No | NA |
7 | RA | No | 13 | 20 | MTX | aCD20 | NA |
8 | HC | Yes | NA | 0 | No | No | NA |
9 | RA | Yes | 10 | 25 | MTX | TNFi | NA |
10 | HC | No | NA | 0 | No | No | NA |
11 | RA | Yes | 11 | 25 | SLZ+PQ | No | 5 |
RA | Yes | 44 | 0 | No | TNFi | 5 | |
12 | HC | Yes | NA | 0 | No | No | NA |
13 | RA | No | 2 | 15 | MTX | TNFi | NA |
RA | No | 22 | 12.5 | MTX | TNFi | NA | |
14 | RA | Yes | 7 | 0 | SLZ | TNFi | NA |
15 | RA | Yes | 20 | MTX | TNFi | NA | |
16 | RA | No | 11 | 20 | MTX | No | NA |
The CD8+ T cells from 23 donors were pooled into 16 samples based on diagnosis and smoke status. RA, patients with rheumatoid arthritis; HC, healthy controls; MTX, methotrexate; SLZ, sulfasalazine; PQ, Plaquenil; TNFi, TNFa inhibitors (infliximab, golimumab, etanercept); CTLA4, CTLA4-immunoglobulin fusion protein (abatacept); aCD20, anti-CD20 antibodies (rituximab); RNA, ribonucleic acid; NA, not applicable. Sample 9 and 10 are shaded in gray because they were excluded from the analysis.