TABLE 4.
SNP distribution per chromosome identified among the 74 accessions from the three Solanum Canarian taxa.
Chr. 1 | Chr. 2 | Chr. 3 | Chr. 4 | Chr. 5 | Chr. 6 | Chr. 7 | Chr. 8 | Chr. 9 | Chr. 10 | Chr. 11 | Chr. 12 | Average | Total | |
Whole SNP set | 951 | 339 | 606 | 479 | 412 | 603 | 618 | 465 | 557 | 693 | 336 | 445 | 542.0 | 6,504 |
Targeted SNPs | 49 | 13 | 21 | 16 | 24 | 24 | 21 | 26 | 31 | 26 | 12 | 21 | 23.7 | 284 |
Untargeted SNPs | 902 | 326 | 585 | 463 | 388 | 579 | 597 | 439 | 526 | 667 | 324 | 424 | 518.3 | 6,220 |
Filtered SNP set | 226 | 56 | 147 | 100 | 81 | 145 | 118 | 83 | 133 | 152 | 84 | 96 | 118.4 | 1,421 |
Targeted SNPs | 6 | 1 | 4 | 2 | 4 | 1 | 0 | 3 | 5 | 3 | 3 | 2 | 2.8 | 34 |
Untargeted SNPs | 220 | 55 | 143 | 98 | 77 | 144 | 118 | 80 | 128 | 149 | 81 | 94 | 115.6 | 1,387 |