Table 3.
Target | Country | Name | Type | Sequence (5’ → 3′) |
---|---|---|---|---|
N | US-CDC | 2019-nCoV_N1-F | F | GAC CCC AAA ATC AGC GAA AT |
2019-nCoV_N1-R | R | TCT GGT TAC TGC CAG TTG AAT CTG | ||
2019-nCoV_N1-P | P | ACC CCG CAT TAC GTT TGG TGG ACC | ||
2019-nCoV_N2-F | F | TTA CAA ACA TTG GCC GCA AA | ||
2019-nCoV_N2-R | R | GCG CGA CAT TCC GAA GAA | ||
2019-nCoV_N2-P | P | ACA ATT TGC CCC CAG CGC TTC AG | ||
2019-nCoV_N3-F | F | GGG AGC CTT GAA TAC ACC AAA A | ||
2019-nCoV_N3-R | R | TGT AGC ACG ATT GCA GCA TTG | ||
2019-nCoV_N3-P | P | AYC ACA TTG GCA CCC GCA ATC CTG | ||
Charité Germany |
N_Sarbeco_F | F | CAC ATT GGC ACC CGC AAT C | |
N_Sarbeco_R | R | GAG GAA CGA GAA GAG GCT TG | ||
N_Sarbeco_P | P | ACT TCC TCA AGG AAC AAC ATT GCC A | ||
Chinese-CDC | CCDC-N-F | F | GGG GAA CTT CTC CTG CTA GAA T | |
CCDC-N-R | R | CAG ACA TTT TGC TCT CAA GCT G | ||
CCDC-N-P | P | TTG CTG CTG CTT GAC AGA TT | ||
Hong Kong University |
HKU-N-F | F | TAA TCA GAC AAG GAA CTG ATT A | |
HKU-N-R | R | CGA AGG TGT GAC TTC CAT G | ||
HKU-N-P | P | GCA AAT TGT GCA ATT TGC GG | ||
NIID Japan | NIID_2019-nCOV_N_F2 | F | AAA TTT TGG GGA CCA GGA AC | |
NIID_2019-nCOV_N_R2 | R | TGG CAG CTG TGT AGG TCA AC | ||
NIID_2019-nCOV_N_P2 | P | ATG TCG CGC ATT GGC ATG GA | ||
E | Charité Germany |
E_Sarbeco_F1 | F | ACA GGT ACG TTA ATA GTT AAT AGC GT |
E_Sarbeco_R2 | R | ATA TTG CAG CAG TAC GCA CAC A | ||
E_Sarbeco_P1 | P | ACA CTA GCC ATC CTT ACT GCG CTT CG | ||
RdRp | Charité Germany |
RdRp_SARSr-F | F | GTG ARA TGG TCA TGT GTG GCG G |
RdRp_SARSr-R | R | CAR ATG TTA AAS ACA CTA TTA GCA TA | ||
RdRp_SARSr-P2 | P | CAG GTG GAA CCT CAT CAG GAG ATG C | ||
ORF1 | Chinese-CDC | CCDC-ORF1-F | F | CCC TGT GGG TTT TAC ACT TAA |
CCDC-ORF1-R | R | ACG ATT GTG CAT CAG CTG A | ||
CCDC-ORF1-P | P | CCG TCT GCG GTA TGT GGA AAG GTT ATG G | ||
Hong Kong University |
HKU-ORF1-F | F | TGG GGY TTT ACR GGT AAC CT | |
HKU-ORF1-R | R | AAC RCG CTT AAC AAA GCA CTC | ||
HKU-ORF1-P | P | TAG TTG TGA TGC WAT CAT GAC TAG | ||
RNAse P (control) | US-CDC | RP-F | F | AGA TTT GGA CCT GCG AGC G |
RP-R | R | GAG CGG CTG TCT CCA CAA GT | ||
RP-P | P | TTC TGA CCT GAA GGC TCT GCG CG |