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. 2020 Jul 25;23(8):101406. doi: 10.1016/j.isci.2020.101406

Table 3.

Primers and Probes for RT-PCR COVID-19 Diagnostics

Target Country Name Type Sequence (5’ → 3′)
N US-CDC 2019-nCoV_N1-F F GAC CCC AAA ATC AGC GAA AT
2019-nCoV_N1-R R TCT GGT TAC TGC CAG TTG AAT CTG
2019-nCoV_N1-P P ACC CCG CAT TAC GTT TGG TGG ACC
2019-nCoV_N2-F F TTA CAA ACA TTG GCC GCA AA
2019-nCoV_N2-R R GCG CGA CAT TCC GAA GAA
2019-nCoV_N2-P P ACA ATT TGC CCC CAG CGC TTC AG
2019-nCoV_N3-F F GGG AGC CTT GAA TAC ACC AAA A
2019-nCoV_N3-R R TGT AGC ACG ATT GCA GCA TTG
2019-nCoV_N3-P P AYC ACA TTG GCA CCC GCA ATC CTG
Charité
Germany
N_Sarbeco_F F CAC ATT GGC ACC CGC AAT C
N_Sarbeco_R R GAG GAA CGA GAA GAG GCT TG
N_Sarbeco_P P ACT TCC TCA AGG AAC AAC ATT GCC A
Chinese-CDC CCDC-N-F F GGG GAA CTT CTC CTG CTA GAA T
CCDC-N-R R CAG ACA TTT TGC TCT CAA GCT G
CCDC-N-P P TTG CTG CTG CTT GAC AGA TT
Hong Kong
University
HKU-N-F F TAA TCA GAC AAG GAA CTG ATT A
HKU-N-R R CGA AGG TGT GAC TTC CAT G
HKU-N-P P GCA AAT TGT GCA ATT TGC GG
NIID Japan NIID_2019-nCOV_N_F2 F AAA TTT TGG GGA CCA GGA AC
NIID_2019-nCOV_N_R2 R TGG CAG CTG TGT AGG TCA AC
NIID_2019-nCOV_N_P2 P ATG TCG CGC ATT GGC ATG GA
E Charité
Germany
E_Sarbeco_F1 F ACA GGT ACG TTA ATA GTT AAT AGC GT
E_Sarbeco_R2 R ATA TTG CAG CAG TAC GCA CAC A
E_Sarbeco_P1 P ACA CTA GCC ATC CTT ACT GCG CTT CG
RdRp Charité
Germany
RdRp_SARSr-F F GTG ARA TGG TCA TGT GTG GCG G
RdRp_SARSr-R R CAR ATG TTA AAS ACA CTA TTA GCA TA
RdRp_SARSr-P2 P CAG GTG GAA CCT CAT CAG GAG ATG C
ORF1 Chinese-CDC CCDC-ORF1-F F CCC TGT GGG TTT TAC ACT TAA
CCDC-ORF1-R R ACG ATT GTG CAT CAG CTG A
CCDC-ORF1-P P CCG TCT GCG GTA TGT GGA AAG GTT ATG G
Hong Kong
University
HKU-ORF1-F F TGG GGY TTT ACR GGT AAC CT
HKU-ORF1-R R AAC RCG CTT AAC AAA GCA CTC
HKU-ORF1-P P TAG TTG TGA TGC WAT CAT GAC TAG
RNAse P (control) US-CDC RP-F F AGA TTT GGA CCT GCG AGC G
RP-R R GAG CGG CTG TCT CCA CAA GT
RP-P P TTC TGA CCT GAA GGC TCT GCG CG