TABLE 3.
Number of reads of the putatively wrong (number at the left) and right (number at the right) bat species in samples showing traces of reads of the wrong species. Ratios > 1% are written in bold
| Samples | Epp‐degen | fwh1 | fwh2 | fwhFol | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PCR1 | PCR2 | PCR3 | PCR1 | PCR2 | PCR3 | PCR1 | PCR2 | PCR3 | PCR1 | PCR2 | PCR3 | ||
| Rf/Me | Me‐ANN‐0002 | 6/4330 | 13/9703 | 9/7250 | 74/11416 | 62/10914 | 63/13143 | 45/6342 | 28/6560 | 38/7137 | 430/4875 | 382/4226 | 206/4343 |
| Me‐ANN‐0004 | 2/5161 | 0/3370 | 1/7014 | 1/10315 | 6/10423 | 3/10762 | 0/5407 | 0/4950 | 0/5930 | 18/3715 | 5/2806 | 7/2742 | |
| Me‐BEA‐0061 | 3/5066 | 0/3140 | 0/5699 | 0/6277 | 0/5893 | 0/4795 | 6/3638 | 1/2904 | 3/2258 | 0/2364 | 0/1088 | 1/1449 | |
| Me‐BEA‐0082 | 13/1430 | 7/1240 | 36/2783 | 39/5294 | 21/3286 | 42/4160 | 0/3477 | 0/2092 | 0/3106 | 118/1932 | 94/1453 | 100/1472 | |
| Me‐BEA‐0088 | 6/7408 | 3/6571 | 3/4814 | 6/10635 | 39/10779 | 45/8989 | 0/6941 | 0/7497 | 0/5964 | 108/3161 | 42/4305 | 90/2767 | |
| Me‐SGE‐0010 | 1/7750 | 0/3138 | 0/7362 | 0/4713 | 0/2971 | 0/4473 | 0/2392 | 0/1966 | 0/2757 | 2/1406 | 5/2602 | 0/2143 | |
| Me‐SGE‐0015 | 16/5271 | 6/2223 | 66/6961 | 2/2570 | 7/3481 | 5/2433 | 0/1915 | 0/5209 | 0/2620 | 81/2030 | 55/2370 | 55/1945 | |
| Me/Rf: | Rf‐ALL‐0001 | 2/1561 | 2/2043 | 2/3788 | 1/1520 | 18/3132 | 8/2033 | 3/79 | 15/187 | 8/111 | 1/1508 | 3/2978 | 5/1957 |
| Rf‐LES‐0003 | 0/3804 | 0/2965 | 0/2825 | 3/680 | 0/882 | 1/1100 | 10/58 | 0/33 | 9/53 | 0/2034 | 0/2103 | 0/1839 | |
| Rf‐LES‐0004 | 0/3529 | 0/5397 | 0/1767 | 0/9093 | 0/6182 | 0/3280 | 0/1839 | 0/1117 | 0/1097 | 0/2737 | 0/6083 | 0/2721 | |
| Rf‐SGE‐0001 | 0/1503 | 2/5719 | 1/3244 | 2/3577 | 18/3411 | 10/4960 | 24/280 | 22/327 | 10/562 | 9/3202 | 4/2385 | 8/1836 | |
| Rf‐SGE‐0003 | 3/2751 | 2/1403 | 8/3053 | 52/2669 | 0/1748 | 14/1072 | 140/304 | 0/248 | 78/139 | 48/2462 | 0/2075 | 28/1493 | |
| Mix‐BEA‐0002 | 197/1868 | 111/1136 | 135/1169 | 841/2366 | 822/2610 | 792/2146 | 1317/239 | 1162/284 | 1043/177 | 555/2304 | 748/3827 | 417/1346 | |
| MG2 | MG2ANML‐degen | MG2fwh | mlHCO | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PCR1 | PCR2 | PCR3 | PCR1 | PCR2 | PCR3 | PCR1 | PCR2 | PCR3 | PCR1 | PCR2 | PCR3 | ||
| Rf/Me | Me‐ANN‐0002 | 16/8100 | 73/11908 | 47/9441 | 13/9335 | 20/7747 | 24/10514 | 91/12035 | 68/11445 | 36/9510 | 0/2292 | 0/2303 | 0/2024 |
| Me‐ANN‐0004 | 2/8300 | 2/6448 | 0/8725 | 0/7160 | 2/11378 | 0/11507 | 2/12072 | 1/6819 | 5/7782 | 0/2673 | 0/4785 | 0/3787 | |
| Me‐BEA‐0061 | 7/6983 | 0/5113 | 0/6813 | 0/3721 | 0/3724 | 0/3251 | 3/4845 | 1/2384 | 3/3645 | 0/2163 | 3/1803 | 0/2138 | |
| Me‐BEA‐0082 | 7/2668 | 2/2048 | 8/2970 | 5/2965 | 1/2815 | 6/2146 | 13/3332 | 7/2543 | 10/2922 | 0/2149 | 0/2394 | 0/1266 | |
| Me‐BEA‐0088 | 8/10747 | 7/9836 | 14/7082 | 2/5670 | 4/8671 | 12/7289 | 17/8210 | 3/7934 | 8/6164 | 0/2158 | 0/3972 | 0/3551 | |
| Me‐SGE‐0010 | 2/9093 | 0/6317 | 10/8806 | 0/3347 | 0/2227 | 0/2633 | 0/3013 | 1/3701 | 0/4660 | 0/3475 | 0/1810 | 0/2500 | |
| Me‐SGE‐0015 | 34/7890 | 18/6096 | 67/8753 | 0/3015 | 0/3555 | 0/3381 | 1/2993 | 9/3440 | 3/2956 | 0/2556 | 0/2446 | 0/1326 | |
| Me/Rf: | Rf‐ALL‐0001 | 0/1708 | 18/2540 | 56/3467 | 0/624 | 0/383 | 0/295 | 0/1359 | 17/1684 | 3/1691 | 17/69 | 10/22 | 13/20 |
| Rf‐LES‐0003 | 0/2787 | 23/2175 | 0/1982 | 0/165 | 0/228 | 0/196 | 0/789 | 0/722 | 0/774 | 0/2 | 0/68 | 0/23 | |
| Rf‐LES‐0004 | 0/5258 | 0/6837 | 0/2408 | 0/3549 | 0/3680 | 0/2972 | 0/3538 | 1/5278 | 2/3923 | 0/986 | 0/970 | 0/759 | |
| Rf‐SGE‐0001 | 53/2351 | 44/5278 | 2/3460 | 2/1121 | 5/1344 | 0/792 | 15/2717 | 5/2032 | 30/1737 | 14/144 | 0/273 | 2/373 | |
| Rf‐SGE‐0003 | 0/3788 | 118/2337 | 0/3768 | 0/740 | 0/433 | 0/298 | 0/1098 | 10/1095 | 0/821 | 0/200 | 0/286 | 0/130 | |
| Mix‐BEA‐0002 | 2148/2768 | 1425/1824 | 1286/1561 | 487/795 | 368/695 | 354/313 | 864/1403 | 884/1756 | 564/1074 | 863/77 | 744/101 | 363/20 | |
Rf = R. ferrumequinum; Me = M. emarginatus.