Table 1.
Degradation pathways related to enzymes in the Prevotella CAZy-cluster. KEGG ortholog codes23–25 were analyzed with GOMixer pathway analyzer. See text for details.
| Module ID | Module name | Orthologs |
|---|---|---|
| MF0064 | Pectin degradation | K01051 |
| K01184 | ||
| K01213 | ||
| MF0065 | Pectin degradation-5-dehydro-4-deoxy-d-glucuronate degradation | K01728 |
| K01730 | ||
| K01815 | ||
| K00874 | ||
| K01625 | ||
| MF0091 | Beta-d-glucuronide and d-glucuronate degradation | K00040 |
| K00874 | ||
| K01195 | ||
| K01686 | ||
| K01812 | ||
| MF0071 | d-Galacturonate degradation | K01812 |
| K00041 | ||
| K01685 | ||
| K00874 | ||
| MF0062 | Starch degradation | K01176 |
| K01200 | ||
| K01187 | ||
| MF0047 | Lactose and galactose degradation (PTS) | K02786 + K02787 + K02788 |
| K01220 | ||
| K01819 | ||
| K00917 | ||
| K01635 | ||
| K08302 | ||
| MF0048 | Lactose degradation | K01190 |
| MF0066 | Glycogen metabolism | K00975 |
| K00703 | ||
| K00700 | ||
| K00688 | ||
| K01187 | ||
| K00705 | ||
| MF0056 | Galactose degradation (Leloir pathway) | K01785 |
| K00849 | ||
| K00965 | ||
| K01784 | ||
| K01838 | ||
| MF0050 | Melibiose degradation | K07407 |
| MF0003 | Acetylglucosamine degradation | K00884 |
| K01443 | ||
| K02564 | ||
| MF0093 | Homoacetogenesis (acetate production) | K05299 + K15022 |
| K01938 | ||
| K01491 | ||
| K00297 | ||
| K15023 | ||
| K00191 K00192 + K14138 K00196 + K14138 K00198 + K14138 K03518 + K03519 + K03520 + K14138 | ||
| MF002 | Ethanol production (CO2 pathway) | K01568 |
| K00001 K00121 K04072 K11440 K13953 K13954 |