Table 3.
Lenient precision, recall, and F1 score of the proposed approaches for named entity recognition.
Entity type | Joint | Contextual-joint | Positional-joint | Knowledge-joint | ||||||||
|
Precision | Recall | F1 score | Precision | Recall | F1 score | Precision | Recall | F1 score | Precision | Recall | F1 score |
Drug | 0.956 | 0.952 | 0.954 | 0.956 | 0.964 | 0.960 | 0.956 | 0.964 | 0.960 | 0.956 | 0.964 | 0.960 |
Strength | 0.980 | 0.969 | 0.974 | 0.982 | 0.971 | 0.976 | 0.985 | 0.976 | 0.980 | 0.985 | 0.976 | 0.980 |
Form | 0.974 | 0.942 | 0.958 | 0.975 | 0.939 | 0.957 | 0.972 | 0.943 | 0.958 | 0.972 | 0.943 | 0.958 |
Frequency | 0.981 | 0.958 | 0.970 | 0.981 | 0.958 | 0.969 | 0.979 | 0.964 | 0.971 | 0.979 | 0.964 | 0.971 |
Route | 0.964 | 0.942 | 0.953 | 0.962 | 0.943 | 0.952 | 0.950 | 0.949 | 0.949 | 0.950 | 0.949 | 0.949 |
Dosage | 0.943 | 0.938 | 0.941 | 0.941 | 0.937 | 0.939 | 0.936 | 0.957 | 0.946 | 0.936 | 0.957 | 0.946 |
Duration | 0.887 | 0.788 | 0.835 | 0.914 | 0.791 | 0.848 | 0.880 | 0.815 | 0.846 | 0.880 | 0.815 | 0.846 |
ADEa | 0.649 | 0.358 | 0.462 | 0.643 | 0.346 | 0.450 | 0.660 | 0.426 | 0.518 | 0.589 | 0.490 | 0.535 |
Reason | 0.757 | 0.611 | 0.676 | 0.747 | 0.636 | 0.687 | 0.747 | 0.672 | 0.708 | 0.753 | 0.702 | 0.727 |
Overall (micro) | 0.948 | 0.912 | 0.929 | 0.947 | 0.917 | 0.932 | 0.943 | 0.926 | 0.934 | 0.941 | 0.930 | 0.935 |
aADE: adverse drug event.