Table 4.
Lenient precision, recall, and F1 score of the proposed approaches for relation extraction.
Relation type | Joint | Contextual-joint | Positional-joint | Knowledge-joint | |||||||||||
|
Precision | Recall | F1 score | Precision | Recall | F1 score | Precision | Recall | F1 score | Precision | Recall | F1 score | |||
Drug−strength | 0.966 | 0.962 | 0.964 | 0.977 | 0.964 | 0.971 | 0.978 | 0.971 | 0.975 | 0.978 | 0.971 | 0.975 | |||
Drug−form | 0.963 | 0.936 | 0.949 | 0.972 | 0.936 | 0.953 | 0.969 | 0.939 | 0.954 | 0.969 | 0.939 | 0.954 | |||
Drug−frequency | 0.961 | 0.949 | 0.955 | 0.972 | 0.950 | 0.961 | 0.969 | 0.955 | 0.962 | 0.969 | 0.955 | 0.962 | |||
Drug−route | 0.943 | 0.931 | 0.937 | 0.954 | 0.933 | 0.943 | 0.936 | 0.939 | 0.937 | 0.936 | 0.939 | 0.937 | |||
Drug−dosage | 0.921 | 0.928 | 0.924 | 0.933 | 0.931 | 0.932 | 0.925 | 0.950 | 0.937 | 0.925 | 0.950 | 0.937 | |||
Drug−duration | 0.814 | 0.718 | 0.763 | 0.880 | 0.723 | 0.794 | 0.823 | 0.739 | 0.779 | 0.823 | 0.739 | 0.779 | |||
Drug−ADEa | 0.590 | 0.322 | 0.417 | 0.592 | 0.307 | 0.404 | 0.590 | 0.377 | 0.460 | 0.544 | 0.446 | 0.490 | |||
Drug−reason | 0.682 | 0.526 | 0.594 | 0.676 | 0.546 | 0.604 | 0.680 | 0.593 | 0.633 | 0.673 | 0.628 | 0.650 | |||
Overall (micro) | 0.912 | 0.859 | 0.885 | 0.920 | 0.862 | 0.890 | 0.912 | 0.877 | 0.894 | 0.906 | 0.884 | 0.895 |
aADE: adverse drug event.